PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62040490-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 292aa MW: 32395 Da PI: 9.0971 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.4 | 5.8e-12 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT+eE+ l+ +v+++G+g W tI r R+ ++k++w++ AUR62040490-RA 5 KQKWTAEEEAALKAGVRKHGSGKWQTILRDPEfsnvlCSRSNVDLKDKWRN 55 79**********************************999**********99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MGAPKQKWTA EEEAALKAGV RKHGSGKWQT ILRDPEFSNV LCSRSNVDLK DKWRNINVTL 60 SGLGSREKAR LALKRNPQIP KLDDKPSVVN HFRSDEDAVE DELVGTPSET VQVADSKKTY 120 TRLDNLILEA ITTLQEPKGC DRNAIAMYIE ERFWAPPNFS KLLASKLKFM ASNGQLIKVK 180 HRYRISESLP YSETRKDLLD SKYKDHAKLE SKELKIFTRS EVVAELGKMK SLSPHEAASA 240 AARAVAEAEV AIMEAEKATR EAEAAEAEAE AAKVFAEAAI KALKCQNLRA C* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 4e-73 | MYB_related family protein |