PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62040462-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 482aa MW: 54370.7 Da PI: 5.5292

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62040462-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28	5.2e-09	370	417	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47 ++WT +E lvd+ q+G+g+W+++ +t+ +Rt+ +++++w+++ AUR62040462-RA 370 QPWTLDEVVALVDGMSQFGPGQWTAVKKTFFlsSRRTATDIRDKWRNL 417 79*****************************9**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MNEVKKDEHY IADLAYGSSD ARHMWAEPKE DQASALYFDA NFEDAFKIDD ISSVFHYELL 60 AENGGLNSYM TEEGKGEILC SDFDGILHED KLTNLPLAVS ISHASEDHYL DVDFDKKVPD 120 LDCKFYDELS VGNLRSEIHS PETSNEEVGV SESSVLVPRC FNDQFGKTAK EMHGDLGSKC 180 RYQIPLEDNM GLKCSLVSDV KYVQDTNDDR NTLEIGSSFN DDRDNTHVSF PCVKPPYISI 240 YTHDEVGSAS QCTDVDDFCV EDPSTDSCAE TKITRARQRR LCRPPQRYLD GTSSLKLRLH 300 NAKKHPSSLL EDKDLGARFL KKHSRKALEV KASKTWASDM ELDSDEEYEP VESSFNGRKL 360 KRNDRRKSCQ PWTLDEVVAL VDGMSQFGPG QWTAVKKTFF LSSRRTATDI RDKWRNLVKT 420 NCRSSKGKKD DQRNNSHVLP NPVIERVREL ASAPPVLRGR GRGIRKLSAL KCPDMSPCLA 480 E*

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MNEVKKDEHY IADLAYGSSD ARHMWAEPKE DQASALYFDA NFEDAFKIDD ISSVFHYELL  60
AENGGLNSYM TEEGKGEILC SDFDGILHED KLTNLPLAVS ISHASEDHYL DVDFDKKVPD  120
LDCKFYDELS VGNLRSEIHS PETSNEEVGV SESSVLVPRC FNDQFGKTAK EMHGDLGSKC  180
RYQIPLEDNM GLKCSLVSDV KYVQDTNDDR NTLEIGSSFN DDRDNTHVSF PCVKPPYISI  240
YTHDEVGSAS QCTDVDDFCV EDPSTDSCAE TKITRARQRR LCRPPQRYLD GTSSLKLRLH  300
NAKKHPSSLL EDKDLGARFL KKHSRKALEV KASKTWASDM ELDSDEEYEP VESSFNGRKL  360
KRNDRRKSCQ PWTLDEVVAL VDGMSQFGPG QWTAVKKTFF LSSRRTATDI RDKWRNLVKT  420
NCRSSKGKKD DQRNNSHVLP NPVIERVREL ASAPPVLRGR GRGIRKLSAL KCPDMSPCLA  480
E*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-16	MYB_related family protein