PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039840-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 458aa    MW: 50995.4 Da    PI: 6.5118
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039840-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS467.11e-142474541374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+cA++vs+g+l +a+ +L+++s+la+pdgd+mqR+aayf+e L++r+++s++++y+al+ ++ +   +see+ a+kl++e++P+lk+++
  AUR62039840-RA  47 LIHLLLACANHVSNGSLDNANLALEQISHLAAPDGDTMQRIAAYFAESLSERVLKSWPGIYRALQFTRMP--VVSEEILARKLYFELFPFLKLAF 139
                     689***************************************************************9999..6********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++Nq Ilea++ge++vHiiD+++s+++QW+aL+qaL++Rpegpp+lRiTgv++    +ke le++++rL++ Ae+l++pf+fn+ v+ +le+l+
  AUR62039840-RA 140 VVTNQSILEAMDGEKMVHIIDLNASEPAQWIALIQALSARPEGPPHLRITGVHQ----QKEVLEQVAHRLTDEAEKLDLPFQFNP-VVCKLENLD 229
                     ******************************************************....9**************************.6888***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll.........................................desvsleserdevLklvkslsPkvvvvveq 244
                     +e+Lrvk+gEala+++vlqlh+ll                                           sv+ + + d +L  +++lsPk++v++eq
  AUR62039840-RA 230 VEKLRVKTGEALAISSVLQLHTLLatddetlrkssslglfnhvnganggnanrrsspsndsasssPTSVNASAKMDGFLASLWGLSPKIMVITEQ 324
                     *************************************************************9866445555558999****************** PP

            GRAS 245 eadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakl 339
                     +++hn++ ++er++eal++y+alfd+le++lpr+s er+kvE++llg+ei+n++aceg errerhe+l +W +rl+ aGF+++pls+  + qa++
  AUR62039840-RA 325 DSNHNGSGLMERLSEALYFYAALFDCLESTLPRASVERRKVEKMLLGEEIKNIIACEGGERRERHEKLDRWMQRLDIAGFGSIPLSYMGMLQARR 419
                     *********************************************************************************************** PP

            GRAS 340 llrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ll+ ++ dgyr++ee+g++v++W+drpL+svSaWr
  AUR62039840-RA 420 LLQGCSCDGYRIKEENGCVVICWQDRPLFSVSAWR 454
                     **********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    
MGPMLQDDGS SVTSSSPLQF FSRMSPNIGS SHPWLRELKP EERGLYLIHL LLACANHVSN  60
GSLDNANLAL EQISHLAAPD GDTMQRIAAY FAESLSERVL KSWPGIYRAL QFTRMPVVSE  120
EILARKLYFE LFPFLKLAFV VTNQSILEAM DGEKMVHIID LNASEPAQWI ALIQALSARP  180
EGPPHLRITG VHQQKEVLEQ VAHRLTDEAE KLDLPFQFNP VVCKLENLDV EKLRVKTGEA  240
LAISSVLQLH TLLATDDETL RKSSSLGLFN HVNGANGGNA NRRSSPSNDS ASSSPTSVNA  300
SAKMDGFLAS LWGLSPKIMV ITEQDSNHNG SGLMERLSEA LYFYAALFDC LESTLPRASV  360
ERRKVEKMLL GEEIKNIIAC EGGERRERHE KLDRWMQRLD IAGFGSIPLS YMGMLQARRL  420
LQGCSCDGYR IKEENGCVVI CWQDRPLFSV SAWRCRR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein