PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62039741-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | ARR-B | ||||||||
Protein Properties | Length: 428aa MW: 46646.9 Da PI: 6.6265 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 78.8 | 6.6e-25 | 175 | 224 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kprl W+ eLH++Fv+av+qL G++kA Pk+il+lm+v+gLt+e+v+SHLQ AUR62039741-RA 175 KPRLFWSVELHQKFVDAVNQL-GPDKAFPKKILDLMNVEGLTREKVASHLQ 224 79*******************.****************************9 PP | |||||||
2 | Myb_DNA-binding | 39.5 | 1.3e-12 | 177 | 224 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 r+ W+ e+++++vdav+qlG++ +k+I m+ +g+t++ + s++q AUR62039741-RA 177 RLFWSVELHQKFVDAVNQLGPDkaFPKKILDLMNvEGLTREKVASHLQ 224 678*****************99************************98 PP | |||||||
3 | Response_reg | 84.9 | 2.4e-28 | 16 | 124 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + ++l+ ++l+k +y +v+++ +++eal+llke++ +D++++D+emp+++G++ll+ e+klp+i+++a+++ + + + +k G AUR62039741-RA 16 VLVVDDDTTCLKLMDNLLKKCHY-QVTTTNQAREALKLLKENNnkFDIVITDVEMPDINGFKLLQLVGL-EMKLPVIMLSAYSDTKRVMQGVKNG 108 89*********************.***************998889*******************87755.569********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp+ ++el + AUR62039741-RA 109 ACDYLVKPVRIQELQN 124 *************976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 428 aa Download sequence |
MNSLVENERF PMGLRVLVVD DDTTCLKLMD NLLKKCHYQV TTTNQAREAL KLLKENNNKF 60 DIVITDVEMP DINGFKLLQL VGLEMKLPVI MLSAYSDTKR VMQGVKNGAC DYLVKPVRIQ 120 ELQNIWQHVV RRNNKLIPPR GVAKRGEGTE VSCGDDINDD DEDEMENEDP STQKKPRLFW 180 SVELHQKFVD AVNQLGPDKA FPKKILDLMN VEGLTREKVA SHLQPGSKLG SIGADPEDAH 240 IGGGYGIYRS LAGNGKFPNI TSIPQQAAGG MLGRFNTNDG LFSLRALSSS PVMNFGNISS 300 FPANQNTLLS TTVQMNNKVS PATDGTSLLP LNARDLGGGH QISNIGGVGV GGGANLKARW 360 GATIECPQNL LSTSGNTHQN QSIQNDPLQF CNGVSSKGNV VDDPKLFCGR GQSSSESLED 420 VLGRFLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G25180.1 | 4e-86 | ARR-B family protein |