PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62039492-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HSF

Protein Properties

Length: 408aa MW: 46840.1 Da PI: 5.1563

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62039492-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111	8.2e-35	16	107	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+++++++sws++++sf+vl++ ef++ +Lp++Fkh+nf+SF+RQLn+YgF+kv+ e+ weF+++ F +g+ +ll++ AUR62039492-RA 16 FLTKTYEMVDDPTTDSIVSWSSTNKSFIVLNPPEFSRVLLPRFFKHNNFSSFIRQLNTYGFRKVDPEQ---------WEFANDDFIRGQSHLLKN 101 9*************************************************************9998.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k AUR62039492-RA 102 IHRRKP 107 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MMMDEIQGGS NALPPFLTKT YEMVDDPTTD SIVSWSSTNK SFIVLNPPEF SRVLLPRFFK 60 HNNFSSFIRQ LNTYGFRKVD PEQWEFANDD FIRGQSHLLK NIHRRKPVHS HSLTNLHGQV 120 NSNPLTDSER QKYKDDIERL KHEREYLLAE SQRQRQEEQV LESQVQLVKE RMEYMEKRQH 180 KFVSFFAQKL KKPELAFAVP QVDNHDRKRR VSSRPDYLHD ETINEDSMGA LRISRRGSPD 240 DSSGLDLDTD LLERMESSLT FWENVAEDIE VLCAQRNSSI ELAESTTCVE SPAISYTQLN 300 LDLPSSSSRI DVNSEPPVTA SIVAPDPPQP RKEQEAGNAP AAPQGVNDMF WEQFLTENPG 360 SSDVQEVQSE RKESGLKEKD SRLIDHGRYW LHNLPEHIEQ LTSAGRS*

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MMMDEIQGGS NALPPFLTKT YEMVDDPTTD SIVSWSSTNK SFIVLNPPEF SRVLLPRFFK  60
HNNFSSFIRQ LNTYGFRKVD PEQWEFANDD FIRGQSHLLK NIHRRKPVHS HSLTNLHGQV  120
NSNPLTDSER QKYKDDIERL KHEREYLLAE SQRQRQEEQV LESQVQLVKE RMEYMEKRQH  180
KFVSFFAQKL KKPELAFAVP QVDNHDRKRR VSSRPDYLHD ETINEDSMGA LRISRRGSPD  240
DSSGLDLDTD LLERMESSLT FWENVAEDIE VLCAQRNSSI ELAESTTCVE SPAISYTQLN  300
LDLPSSSSRI DVNSEPPVTA SIVAPDPPQP RKEQEAGNAP AAPQGVNDMF WEQFLTENPG  360
SSDVQEVQSE RKESGLKEKD SRLIDHGRYW LHNLPEHIEQ LTSAGRS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	1e-104	HSF family protein