PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62039448-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 234aa MW: 25917.8 Da PI: 10.8496 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.5 | 3.1e-13 | 78 | 122 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +lG g+W+ I+r + k+Rt+ q+ s+ qk+ AUR62039448-RA 78 PWTEEEHRLFLLGLDKLGRGDWRGISRNFVKTRTPTQVASHAQKH 122 7******************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MTAPPSKSPR TCSQCGHNGH NARTCSEHSV VPPSHTTGFR LFGVTFNADV VSSGYNSDDA 60 LHASRSRTRD RERKRGIPWT EEEHRLFLLG LDKLGRGDWR GISRNFVKTR TPTQVASHAQ 120 KHFLRQTNLN RRRRRSSLFD ITTDTVSRSA SESQLSSLDS TQQTIPFPSP YPSAFSTKQG 180 RSLPPKEREC EPLLSLKLAQ GPGQGPPLDE ESSRRSPTFR GFDGSKDSII SVA* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 65 | 75 | RSRTRDRERKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G70000.2 | 1e-37 | MYB_related family protein |