PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62039129-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | HSF | ||||||||
Protein Properties | Length: 375aa MW: 41983.1 Da PI: 4.4832 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 107.7 | 9.1e-34 | 48 | 139 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+++++ed+++++++sws+ nsf+v+d+ +f++ +Lpk+Fkh+nf+SF+RQLn+YgF+kv+ ++ weF+++ F g+k+ll++ AUR62039129-RA 48 FLIKTFDMVEDPSTDTIVSWSKARNSFIVWDSIKFSTLLLPKFFKHNNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQKHLLRN 133 9****************************************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ AUR62039129-RA 134 IKRRRN 139 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence |
MENVIVKEEE VTIPCNAVTG SSISSSSSVS SFSARPMEGL HEMGPPPFLI KTFDMVEDPS 60 TDTIVSWSKA RNSFIVWDSI KFSTLLLPKF FKHNNFSSFI RQLNTYGFRK VDPDRWEFAN 120 EGFLGGQKHL LRNIKRRRNV GQNIQHQGGA CVEIGHYGLE GEMERLRRDR NVLMSEIVKL 180 RQQQQVSREQ IRTMESRLQS TERKQQQMMT FLAKALTNPA FVQNLMQRNE QGRVFEGIEI 240 GRKRRLTASP SAESLQEEVL SAAVEATEGL ASVESEIQTL FSAALDDESS SDVKEPIVEP 300 DPIPSSVGAN LGSVGEISWE ELLSEDLLGE GEGYVGDEQE VDVPVEDLVP DPSNWGEDLQ 360 DLIDQMGFLR SKPE* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 165 | 170 | RLRRDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 1e-120 | HSF family protein |