PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039041-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 960aa    MW: 108996 Da    PI: 8.8631
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039041-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.63.1e-15341141198
                     HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       ++ lvlp kfa +h+++   + +++l+ +sg  We++l   k+++  + ++GWk+Fvk n+L+e+ ++vF ++++s+f   v +f+
  AUR62039041-RA  34 DFHDHLVLPGKFA-AHMND--LPDKVSLKGPSGALWEIEL--LKSDDLLFVGNGWKDFVKVNDLNENCILVFNYKRSSNF--EVLIFD 114
                     34556********.55444..5668***************..****99**************************998999..888887 PP
2B334.44e-115896591791
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     vlp kfa +++  ++ + ++ l+ +sg  W ++l   k+++  + ++ Wk+Fvk n+Lke+  ++Fk++++s+fe
  AUR62039041-RA 589 VLPQKFAVNMK--EQLPDKVPLKGPSGILWYIEL--MKSDNVLFVGNEWKDFVKVNDLKENNLLMFKYKSNSTFE 659
                     89*****7776..458889***************..********************************9988875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 960 aa     Download sequence    
MEENPECNCC SSWEEEMYWK HFNSVHFCLT LASDFHDHLV LPGKFAAHMN DLPDKVSLKG  60
PSGALWEIEL LKSDDLLFVG NGWKDFVKVN DLNENCILVF NYKRSSNFEV LIFDERSSCE  120
KESAYFVKKR RHTESNLEDQ KKRTASEASS DKIEDNDDEG PAFVVTKKSK KDGEEVVRSR  180
EKLNAPISKK RVLCAATRPK GRLRRVVPPL NPPSDKNIKS GKSIRNENLK EPNQISNQDR  240
IASENGGILP EKDHSQKVLT KSKKKSKGKG TVDELTQNAK DLTTPENGKN SLAADHSHIL  300
KAHSENPVHK NVTAIDPSQT KVKYLFTMEN GDGFRVTDHS YSEKAPSENR LSRNDTSKDR  360
SQTLQEELIT PENSEISPVA DCSPDFEGQA ELAEKEPNGS SIAKDAIPIS VWGPLVTSDY  420
RESSPEKDHS CKSLGKRGQP KKQVPKSSKK SGLKRGVKGF SKEYISNRRP VTEEEKNDAL  480
RRANQKQTEN SFTAIMRPTC VYKRFFLQIP AEWQFKNLFH HKQEVILRVG ENSWHASIVN  540
YGCKNRGIST GWKKFALENF LEEFDVLVFQ LGSQKDEAVV VIDVDIFRVL PQKFAVNMKE  600
QLPDKVPLKG PSGILWYIEL MKSDNVLFVG NEWKDFVKVN DLKENNLLMF KYKSNSTFEK  660
RKLQERLLAS KKSKKDDEGV VCLGEKVKTP TPSPSGNDAA YESRLISKRD YITFENEENF  720
RVIDHSHKLK ALSEKGLSRN DTLEELSQIL KKEMTTPENG EHFPVTDCSH IFKGQAEMGP  780
SGSSGTAKEL NRISRRVVIR PDYRDCSPEE DQYHESHGKR GRPKKQSAYD KLLVINDADM  840
SQRFGCLSLT FSLFLKTASD GKTLCKDYIL NKRPVTEMEK RGALQRANQI QTENSFIAIM  900
RPSCVYKKFF LQCSLSRLSL RTAQIYAHSL LPSLVILRQN ADLGNEHHQL TRICSLFDI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-30B3 family protein