PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62038987-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HB-other

Protein Properties

Length: 1798aa MW: 200973 Da PI: 4.7857

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62038987-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	52.2	1e-16	3	52	8	57
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 t++qle+Le+ ++ yps++ r+eL+ +lgLt+rq ++WF+ rR k++k AUR62038987-RA 3 TASQLEVLEKTYQVATYPSEALRAELSVQLGLTDRQLQMWFCHRRLKDRK 52 889*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1798 aa Download sequence
MKTASQLEVL EKTYQVATYP SEALRAELSV QLGLTDRQLQ MWFCHRRLKD RKPQSAGGSG 60 SGKRAKKGEA AASAAAAVTA TVGPPTVVTQ AILPAVGPKE EMLGAELGNE HGSGSGSGSS 120 PYGHMDPRRA YVSRPGVALP RLSGHKRYYE QPQSVAELRA IAFVEAQLGE PLRDDGPALG 180 MEFDPLPPGA FGAPIGMPHF FGSSRAPHEY QFLPEQPTVR SESYERVAQS HYYGSPSDGP 240 GTKTPPLSSG RSYIHGYEEV PVVYGVPNQM PNLNLMSQGK GGSLLPSTSG DYETIARKSP 300 YINMGMESPF TAHPNSLDNA LIPSERRVTQ EEDAGRLERK RKNEEARIAK EIEAHEKKMR 360 KELERQDILR RKREEQMKKD MEKQDRERRK EEERLLREKQ REEERYQREQ KREMERREKF 420 LLKESIRAEK MKQKEELRRE REAARQKAAN DRAVARRLAK ESTELIEDER LELMEIAASR 480 KCLTSILSLD SETLQNLDSF RDMLRVFPPK SVQLKKPFAM RPWMGSEENV GNLLMVWRFL 540 ITFADVLGLW PFTLDEFVQA FHDYDPRLLG EIHVSLLRTI IKDVEDVART PTTGLGVNQN 600 NVGNPVGGHP QIVEGAYAWG FDIRSWQCNL SPLTWPEVLR QFSLSAGFGP KLKKRNVEQA 660 YSREENEGND GIDIISNLRT GAAVESAVAI MRERGYSNPR KSRHRLTPGT VKFAAFHVLS 720 IEGANGLNIL EVADRIQKSG LRDLTTSKTP EASIAAALSR DTKLFERTAP STYCVRSPYR 780 KDPVDGEAIL SSAREKIQIF KSGFVDGVEA DVDGMEVDDV EKDEDSESDI AEDPEIDDLG 840 TELTPNLDVN PPYDGNSCVP KVDPDNVSRD LHSHVDNTSN GLADTSGALS SAHLESFKEM 900 SDNGCFVEDS VDVGGICQEG NNTDHEDTDI DESFRGEPWV QGLMEGEYSN LSVEERLNAL 960 VALIGVATEG NTIRVVLEER LEAATALKKQ MWAEAQLDKR RLKEEYLMKT PYAAYVTNKT 1020 ESNTMASAPD SRQSPMLAFD ENSTEPMVNP EMQQKPIFDS HNDNNLQADL PSEKNLTTPN 1080 LAAGSDNLAL QQSVYAAERC RAQLKSYIGY KAEEMYVYRS LPLGQDRRRN RYWQFIASAS 1140 CNDPGAGRIF VELHNGGWRL IDSEEGFDAL LASLDVRGVR ECHLHALLRK VESLFKESIR 1200 KQPNMDRQNT VSIKAEASEV HFNPESSGGT DSPNSTVCAS NSEVPEPSSS FKIESGRNNL 1260 EVKNTFKRYK NFEEWMFREC FSSSVLCATK YGKKRCMELV CRCDSCHDVY FFEENHCPSC 1320 HKTYSVFDQS FNFSNHVAQC QEIKVNLEWN LQRLEYPPPR IRLIKALLAL VEVCIPPEAL 1380 QPVWSDAYRK SWGMKLHISA SAEDLLQVLT VLEGVIKRDF LLSNFQTTSE LLASDNANAT 1440 GYVNDSTNFG TVTMLPWVPQ TTAAVALRLM ELDSAISYLP DQKPKDTEPR HFLNLPSKYA 1500 VVRTVQDDEL AGPPGDHQQE DAWFDHGDLG FASIRGSRGR GRGGRSRGGR SQRRVANSRG 1560 GGPSRGLASN ERLGEVLGGW KGRSSRGKGG CKRGRRSVRK KQKPVKKVAS SVGGRSLPEP 1620 IIFDKSPPGF SGRGEWNHVK SRPMQVDEID VNDDSNSERS DYDDDYNGQA SGDEYDDMAI 1680 DDYTAVYNGR PHLSDYNVDD IDEEYDDQDE VGDDRDEIGD DDHRDEVADD VDEDDVDEDD 1740 VDVDDGEYEQ GELEDVGGYL NADSEDEIEG NGDEVGMRDD RDQDDTSESA STDYSSD*

Sequence ? help Back to Top

Protein Sequence Length: 1798 aa Download sequence

MKTASQLEVL EKTYQVATYP SEALRAELSV QLGLTDRQLQ MWFCHRRLKD RKPQSAGGSG  60
SGKRAKKGEA AASAAAAVTA TVGPPTVVTQ AILPAVGPKE EMLGAELGNE HGSGSGSGSS  120
PYGHMDPRRA YVSRPGVALP RLSGHKRYYE QPQSVAELRA IAFVEAQLGE PLRDDGPALG  180
MEFDPLPPGA FGAPIGMPHF FGSSRAPHEY QFLPEQPTVR SESYERVAQS HYYGSPSDGP  240
GTKTPPLSSG RSYIHGYEEV PVVYGVPNQM PNLNLMSQGK GGSLLPSTSG DYETIARKSP  300
YINMGMESPF TAHPNSLDNA LIPSERRVTQ EEDAGRLERK RKNEEARIAK EIEAHEKKMR  360
KELERQDILR RKREEQMKKD MEKQDRERRK EEERLLREKQ REEERYQREQ KREMERREKF  420
LLKESIRAEK MKQKEELRRE REAARQKAAN DRAVARRLAK ESTELIEDER LELMEIAASR  480
KCLTSILSLD SETLQNLDSF RDMLRVFPPK SVQLKKPFAM RPWMGSEENV GNLLMVWRFL  540
ITFADVLGLW PFTLDEFVQA FHDYDPRLLG EIHVSLLRTI IKDVEDVART PTTGLGVNQN  600
NVGNPVGGHP QIVEGAYAWG FDIRSWQCNL SPLTWPEVLR QFSLSAGFGP KLKKRNVEQA  660
YSREENEGND GIDIISNLRT GAAVESAVAI MRERGYSNPR KSRHRLTPGT VKFAAFHVLS  720
IEGANGLNIL EVADRIQKSG LRDLTTSKTP EASIAAALSR DTKLFERTAP STYCVRSPYR  780
KDPVDGEAIL SSAREKIQIF KSGFVDGVEA DVDGMEVDDV EKDEDSESDI AEDPEIDDLG  840
TELTPNLDVN PPYDGNSCVP KVDPDNVSRD LHSHVDNTSN GLADTSGALS SAHLESFKEM  900
SDNGCFVEDS VDVGGICQEG NNTDHEDTDI DESFRGEPWV QGLMEGEYSN LSVEERLNAL  960
VALIGVATEG NTIRVVLEER LEAATALKKQ MWAEAQLDKR RLKEEYLMKT PYAAYVTNKT  1020
ESNTMASAPD SRQSPMLAFD ENSTEPMVNP EMQQKPIFDS HNDNNLQADL PSEKNLTTPN  1080
LAAGSDNLAL QQSVYAAERC RAQLKSYIGY KAEEMYVYRS LPLGQDRRRN RYWQFIASAS  1140
CNDPGAGRIF VELHNGGWRL IDSEEGFDAL LASLDVRGVR ECHLHALLRK VESLFKESIR  1200
KQPNMDRQNT VSIKAEASEV HFNPESSGGT DSPNSTVCAS NSEVPEPSSS FKIESGRNNL  1260
EVKNTFKRYK NFEEWMFREC FSSSVLCATK YGKKRCMELV CRCDSCHDVY FFEENHCPSC  1320
HKTYSVFDQS FNFSNHVAQC QEIKVNLEWN LQRLEYPPPR IRLIKALLAL VEVCIPPEAL  1380
QPVWSDAYRK SWGMKLHISA SAEDLLQVLT VLEGVIKRDF LLSNFQTTSE LLASDNANAT  1440
GYVNDSTNFG TVTMLPWVPQ TTAAVALRLM ELDSAISYLP DQKPKDTEPR HFLNLPSKYA  1500
VVRTVQDDEL AGPPGDHQQE DAWFDHGDLG FASIRGSRGR GRGGRSRGGR SQRRVANSRG  1560
GGPSRGLASN ERLGEVLGGW KGRSSRGKGG CKRGRRSVRK KQKPVKKVAS SVGGRSLPEP  1620
IIFDKSPPGF SGRGEWNHVK SRPMQVDEID VNDDSNSERS DYDDDYNGQA SGDEYDDMAI  1680
DDYTAVYNGR PHLSDYNVDD IDEEYDDQDE VGDDRDEIGD DDHRDEVADD VDEDDVDEDD  1740
VDVDDGEYEQ GELEDVGGYL NADSEDEIEG NGDEVGMRDD RDQDDTSESA STDYSSD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1600	1607	KKQKPVKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein