PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038184-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YC
Protein Properties Length: 179aa    MW: 20332.7 Da    PI: 7.6028
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038184-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC102.43.1e-3247120171
           NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkr 71 
                     qlk fwe+q     +a df+nh+lPlarikki+k+d++v+misa+aPvlls+ace+fi +ltlr+w  +ee + 
  AUR62038184-RA  47 QLKGFWESQcqeSSQAVDFRNHSLPLARIKKIMKSDDNVRMISADAPVLLSRACEMFIQDLTLRAWSCTEEGDA 120
                     79*****9975566889*****************************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MDSHWSFNYP DQQLSFVDNT PRFNDQQPQQ PHVHLAPSGS GNLLQQQLKG FWESQCQESS  60
QAVDFRNHSL PLARIKKIMK SDDNVRMISA DAPVLLSRAC EMFIQDLTLR AWSCTEEGDA  120
AGARLSKGLQ MNQRVDQQHE QAKKWVSRAS RVRSSVWRVG GKHPGYTEKD YQEFLGEA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.31e-30NF-YC family protein