PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62038160-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 155aa MW: 17555.2 Da PI: 7.3369 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33 | 1.4e-10 | 14 | 44 | 1 | 31 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartm 31 rg W++eEde+l+++++ +G g+W++++r AUR62038160-RA 14 RGLWSPEEDEKLINYITTYGHGCWSSVPRLA 44 788*************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MGHHTCCNKQ KVKRGLWSPE EDEKLINYIT TYGHGCWSSV PRLAEILDED CGWKYISCAN 60 CKSKLDDQQY CSKCQATLEL PHRYRLIVTI EDADASITAG IFDKDAEKII GKPITTMLKI 120 HEQENGMEKV SKELRQSIGK ECTLEVKVNK KGYI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.2 | 4e-25 | MYB family protein |