PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62037054-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 198aa MW: 21500.8 Da PI: 6.749 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.1 | 5.4e-10 | 85 | 120 | 1 | 37 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37 rg W + Ed +l+++v ++G+ +W+ Ia++++ gR++ AUR62037054-RA 85 RGHWRPAEDTKLKELVLKFGPQNWNVIAEKLQ-GRSG 120 899*****************************.**97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MDENMNNNSL FSLNSNSNST HPCPPALDLC LCTNTITNRQ DHENTNTGFP IRSSPSSVDG 60 LKGENCQESL VAARNVRRPS KLCSRGHWRP AEDTKLKELV LKFGPQNWNV IAEKLQGRSG 120 SIEESMWKSA MKGNYINILA KQPDEMFPSR VEFCGQSDSN SGGSGSGDSA VNSGYSTSAN 180 ANLNRLPFIN FLGLEAN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 7e-18 | MYB family protein |