PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62036949-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family TCP
Protein Properties Length: 360aa    MW: 40788.2 Da    PI: 7.3255
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62036949-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP110.42.7e-341472942135
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssaseceaesssssas. 83 
                     +  kdrhski T+ g+RdRR+Rls+++a+ fF+Lqd+LGfdk+s t+eWLl q+k +i el+++            +             ss+s 
  AUR62036949-RA 147 TSNKDRHSKIRTAHGLRDRRMRLSLQVARPFFKLQDMLGFDKASRTVEWLLIQSKSSIEELVQSkhgspsgvttkcT-----------TISSTSd 230
                     568*************************************************************6555444433331...........2222221 PP

             TCP  84 ..nsssg.............kaaksaa.kskksqksaasalnlakesrakarararertrekmriknk 135
                       +                 k +k    +  ++++  ++     ke+r+ ar+ra++rt e+++ +++
  AUR62036949-RA 231 dcE---VdstiveeerigcsK-EKRGLsSCARKDEVIKKRKRTTKEERKVARERAKKRTLERKQSREQ 294
                     111...122233444455642.3333223334444444456666788888888888888777766654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MLNSSTLSNN NITTTCTTSP ILYVDNILSY LIDDSNPNSK QDDHYSSNHY STSYYHLPSP  60
LIYNEIDDFV INHDLEFIQQ SFLANNSSIL TDDSSILEVD HSKVVDDSSN KGDEVNGIVE  120
DNEMNNHTIS SNKNAISHGG LMKRKRTSNK DRHSKIRTAH GLRDRRMRLS LQVARPFFKL  180
QDMLGFDKAS RTVEWLLIQS KSSIEELVQS KHGSPSGVTT KCTTISSTSD DCEVDSTIVE  240
EERIGCSKEK RGLSSCARKD EVIKKRKRTT KEERKVARER AKKRTLERKQ SREQVNYTNT  300
SIIKEGNNDY FEVRGDNLTG NWSPLTTTLN YQPSFEVCHQ SAPSYTISTQ RNMVEGPQQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1264269KKRKRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.24e-25TCP family protein