PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62036210-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 685aa    MW: 75903.6 Da    PI: 8.1941
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62036210-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.56.1e-19111211199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f+k+l+ sd+++ grlvlpk +ae++   +++ e+  l+++d +g++W++++++  +++s++yvl+ G     ++ +L++gD+v+F++++  +++
  AUR62036210-RA 111 FEKILSASDASRIGRLVLPKACAEAYfpPINQSEGLPLKIQDIKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGK 203
                     99**************************666667778***************9989999999***9.********************987.8999 PP

                     .EEEEE-S CS
              B3  92 lvvkvfrk 99 
                     lv++ +++
  AUR62036210-RA 204 LVIGYRKA 211
                     99988765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 685 aa     Download sequence    
MPSLNISLRS PSETSNFGLT FSGGVEEGDN SRSSLFQSGQ RPRQILPKPP KNNLAKVSDA  60
NKSSFSPMRV ARPPAEGRLR NQLLPRYWPR ITDQELQKLS GDLNTTIVPL FEKILSASDA  120
SRIGRLVLPK ACAEAYFPPI NQSEGLPLKI QDIKGNEWTF QFRFWPNNNS RMYVLEGVTP  180
CIQSMQLQAG DTVTFSRIDP GGKLVIGYRK ASNTLEVRNT QTSSANPNGV APGESCYPDV  240
ADSLSARNDR SGLQSMGGAK DNQPSVLPEQ SNLVSGNTSW GKSEKLKSKE DVLEQPKPSD  300
KKKMRNIGSK SKRLLINNEE AMEIRVTWDQ AQDLLRPPPN ANPSVIIVDD FEFEEYSEPP  360
VFGKKTYFAT RRSGAQEQWA QCDNCSKWRK LPTETYLPSR WTCSENFWDS TRSLCTSPEE  420
TYPKELDNLV RGSKESRKRK AAESPEQRCE PSGLDALATA ATLGDSDEPS AGATTRHPRH  480
RPGCTCIVCI QPPSGKGKHK PSCVCNVCLT VKRRFKTLMM RKKKRQCERE AEMAQQKSNE  540
LQVKGPQLPK KAAANDVMLN KDNLENEVSQ EKSQERMQLD EGENSSKGHI DLNCHPIREE  600
DSTADAQPSV GIMALAQAAS APDLYMEPNG LANLLGKQPM DTDSCLLLKT CDYVDKCLST  660
KEEHHPSVVK EQEHCKADGV GSSK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1512523KRRFKTLMMRKK
2512525KRRFKTLMMRKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.10.0B3 family protein