PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62036210-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 685aa MW: 75903.6 Da PI: 8.1941

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62036210-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	6.1e-19	111	211	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k+l+ sd+++ grlvlpk +ae++ +++ e+ l+++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ AUR62036210-RA 111 FEKILSASDASRIGRLVLPKACAEAYfpPINQSEGLPLKIQDIKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGK 203 99************************666667778***********99899999999.*******************987.8999 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++ +++ AUR62036210-RA 204 LVIGYRKA 211 99988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MPSLNISLRS PSETSNFGLT FSGGVEEGDN SRSSLFQSGQ RPRQILPKPP KNNLAKVSDA 60 NKSSFSPMRV ARPPAEGRLR NQLLPRYWPR ITDQELQKLS GDLNTTIVPL FEKILSASDA 120 SRIGRLVLPK ACAEAYFPPI NQSEGLPLKI QDIKGNEWTF QFRFWPNNNS RMYVLEGVTP 180 CIQSMQLQAG DTVTFSRIDP GGKLVIGYRK ASNTLEVRNT QTSSANPNGV APGESCYPDV 240 ADSLSARNDR SGLQSMGGAK DNQPSVLPEQ SNLVSGNTSW GKSEKLKSKE DVLEQPKPSD 300 KKKMRNIGSK SKRLLINNEE AMEIRVTWDQ AQDLLRPPPN ANPSVIIVDD FEFEEYSEPP 360 VFGKKTYFAT RRSGAQEQWA QCDNCSKWRK LPTETYLPSR WTCSENFWDS TRSLCTSPEE 420 TYPKELDNLV RGSKESRKRK AAESPEQRCE PSGLDALATA ATLGDSDEPS AGATTRHPRH 480 RPGCTCIVCI QPPSGKGKHK PSCVCNVCLT VKRRFKTLMM RKKKRQCERE AEMAQQKSNE 540 LQVKGPQLPK KAAANDVMLN KDNLENEVSQ EKSQERMQLD EGENSSKGHI DLNCHPIREE 600 DSTADAQPSV GIMALAQAAS APDLYMEPNG LANLLGKQPM DTDSCLLLKT CDYVDKCLST 660 KEEHHPSVVK EQEHCKADGV GSSK*

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MPSLNISLRS PSETSNFGLT FSGGVEEGDN SRSSLFQSGQ RPRQILPKPP KNNLAKVSDA  60
NKSSFSPMRV ARPPAEGRLR NQLLPRYWPR ITDQELQKLS GDLNTTIVPL FEKILSASDA  120
SRIGRLVLPK ACAEAYFPPI NQSEGLPLKI QDIKGNEWTF QFRFWPNNNS RMYVLEGVTP  180
CIQSMQLQAG DTVTFSRIDP GGKLVIGYRK ASNTLEVRNT QTSSANPNGV APGESCYPDV  240
ADSLSARNDR SGLQSMGGAK DNQPSVLPEQ SNLVSGNTSW GKSEKLKSKE DVLEQPKPSD  300
KKKMRNIGSK SKRLLINNEE AMEIRVTWDQ AQDLLRPPPN ANPSVIIVDD FEFEEYSEPP  360
VFGKKTYFAT RRSGAQEQWA QCDNCSKWRK LPTETYLPSR WTCSENFWDS TRSLCTSPEE  420
TYPKELDNLV RGSKESRKRK AAESPEQRCE PSGLDALATA ATLGDSDEPS AGATTRHPRH  480
RPGCTCIVCI QPPSGKGKHK PSCVCNVCLT VKRRFKTLMM RKKKRQCERE AEMAQQKSNE  540
LQVKGPQLPK KAAANDVMLN KDNLENEVSQ EKSQERMQLD EGENSSKGHI DLNCHPIREE  600
DSTADAQPSV GIMALAQAAS APDLYMEPNG LANLLGKQPM DTDSCLLLKT CDYVDKCLST  660
KEEHHPSVVK EQEHCKADGV GSSK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	512	523	KRRFKTLMMRKK
2	512	525	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein