PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035755-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 338aa    MW: 37900.5 Da    PI: 8.3662
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035755-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.13.7e-35251162102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++++sw e+ ++f+v+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF+++ Fk+g+k ll++
  AUR62035755-RA  25 FLTKTYHLVDDPSTNHIVSWGEDDTTFIVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKRGEKPLLCE 110
                     9*****************************************************************99.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k+
  AUR62035755-RA 111 IHRRKT 116
                     ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MAVMVDNCEA LMLSLDNSKS VPAPFLTKTY HLVDDPSTNH IVSWGEDDTT FIVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KRGEKPLLCE IHRRKTGQPH  120
QPTHLNFGHP SAASYLGGCF PSVSLSPPNS TDDDHRDFDS SSGSPPSSSP SAASKSYTDA  180
LTSLSEDNDR LRRSNTMLMS ELAHMRKLYN DIIYFVQNHV KPAAAPVTAN SCYPSASLLN  240
SFNQFIKKGN CSSNYNNNVG DFGRFSSFST ATKRSNLRVL EDNESSSTNC KTKLFGVPIQ  300
SKKRLHPDQM IENNYKARLV LDKHDLGLNL MLPSPSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.11e-108HSF family protein