PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62035717-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 625aa MW: 72448.6 Da PI: 8.8061

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62035717-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.2	1.1e-07	10	52	48	90
FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++++ r+ + tr +Cka+++ k +k+g++ev + +HnHel+ AUR62035717-RA 10 KTRKPRQVSITRSNCKACIRAKVNKEGQFEVVAHVIQHNHELT 52 4677788899*******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence
MVDEEDVNVK TRKPRQVSIT RSNCKACIRA KVNKEGQFEV VAHVIQHNHE LTKPQWHYLH 60 RSKRKMTEEK VVTIKTMKSS GLTTMDTYNY MATEAGGEQN IGHSVVDHLN FCSRLRMEQI 120 EAGDAQTLVN ILSQEQSEDP NFFFRVKFDK EGRICNIFWR DSMMLEDYRI YGDVLVFDTT 180 YRTNRYNLIC APFVGINNHW HNCMFACAFI GDEMTDSFVW LLQTFFKAME DRKPTSIFTD 240 QDQAMANAIL EVIPNTRHRL CIWHLEQNAI TRFGALKKDK EFKFAFNQCL KMCVTEQEFE 300 AKWQAMLQKY ELTEHSWYKR VYELKDKWCP ALCRDFFSAG ILSSQRSEST NHAIGFRASK 360 ATTLTEFYTI FKKTTNRWRS TEKYDEFTCS KSIAFTSLPL SGMLKHAAQV FTLSLFRNFE 420 EEFGYSMATT VQMLGSNEEC LLYQHLDGYV IIASEHLHSV TRIPDKYVSK RWTKFAKTEA 480 WDRLKNQDPK QQYIPWRQTM MRKYYNLILK SQENEETRAF MEESFRNSLK MVEDLLASAA 540 QKESAEAASN IPDVADNTQS NTDASSASST STCVPIILDP KRAVTKGRSK RAKGGLEKSK 600 RKRKPALPPP NSEFGSKTPN LRLF*

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence

MVDEEDVNVK TRKPRQVSIT RSNCKACIRA KVNKEGQFEV VAHVIQHNHE LTKPQWHYLH  60
RSKRKMTEEK VVTIKTMKSS GLTTMDTYNY MATEAGGEQN IGHSVVDHLN FCSRLRMEQI  120
EAGDAQTLVN ILSQEQSEDP NFFFRVKFDK EGRICNIFWR DSMMLEDYRI YGDVLVFDTT  180
YRTNRYNLIC APFVGINNHW HNCMFACAFI GDEMTDSFVW LLQTFFKAME DRKPTSIFTD  240
QDQAMANAIL EVIPNTRHRL CIWHLEQNAI TRFGALKKDK EFKFAFNQCL KMCVTEQEFE  300
AKWQAMLQKY ELTEHSWYKR VYELKDKWCP ALCRDFFSAG ILSSQRSEST NHAIGFRASK  360
ATTLTEFYTI FKKTTNRWRS TEKYDEFTCS KSIAFTSLPL SGMLKHAAQV FTLSLFRNFE  420
EEFGYSMATT VQMLGSNEEC LLYQHLDGYV IIASEHLHSV TRIPDKYVSK RWTKFAKTEA  480
WDRLKNQDPK QQYIPWRQTM MRKYYNLILK SQENEETRAF MEESFRNSLK MVEDLLASAA  540
QKESAEAASN IPDVADNTQS NTDASSASST STCVPIILDP KRAVTKGRSK RAKGGLEKSK  600
RKRKPALPPP NSEFGSKTPN LRLF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-81	FAR1 family protein