PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62035700-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 84aa MW: 9843.44 Da PI: 10.7956 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.3 | 2.4e-12 | 1 | 43 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L AUR62035700-RA 1 MAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 43 58*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 84 aa Download sequence |
MAERRRRKRL NDRLSMLRSV VPKISKMDRT SILGDTIDYM KELLERINKL QEEIDVGSNN 60 NQLNVMSIFK DAKPNDVLVR NSPK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 3 | 10 | ERRRRKRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65640.2 | 6e-29 | bHLH family protein |