PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62035538-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HB-other

Protein Properties

Length: 1192aa MW: 133098 Da PI: 7.3328

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62035538-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.7	9.7e-09	37	83	8	54
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++ ql++Le l+ +++p++++ e+ ++ lgLt +qV+ W+ rR + AUR62035538-RA 37 NPLQLQTLEYLYIDDKNPTQSRLEDYSSALGLTYEQVRRWYVERRRR 83 678******************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 1192 aa Download sequence
MAVQFHHNNG AFTLSPPTTL NDFDEDNDAG YTLFRKNPLQ LQTLEYLYID DKNPTQSRLE 60 DYSSALGLTY EQVRRWYVER RRRDDPDAGK NIGVNRSVQS TAKGKSKMKK KKNLSSLELG 120 EPGDCTIRPG LIQDMLYSSD YIFKKIFRKD GPPLGVEFDP IPETTFQGRN DIPDGHLLGV 180 SLVQPFVTIF GKGNKQADGS GQPFGAGSPV KHREKNDVTK SAVLEAEQWN RMKTPMKKHG 240 KGKGLMSDLQ LVNYLASFRD NVGASKRGKM LARKNSQPGK TYGMGKGFMT ASQLVNPDSK 300 RRPLRRKPAA LRRSVNKVQE KKKPIFQRRK VDSSQKATQK ARKDCCKIAL DLASHDKNLC 360 SFPTKADDEE LELMELQAGP NPLTCGAHFA NGGKTKNNGC SLCKGLLPKF PPESVRMRKP 420 FHMQPWNSSL ELEKKLFKAL HFLYTYAVIL DVYPFTLDDF AKAFLDKDSS LLGKLHVCLL 480 GLLLSDIQNE ISNGLSIHSN KNGMFLNFLH MTETQDSVVN FWKTSLNPLT WTEILRQVLI 540 AAGFGSKDGN QSKGCLTKET DCMAKYGLQP DTLKGKLFSI LFEQGNSGMK VTELAKSSQI 600 ADLNLGKTDD ELEDSICSIL ASDITLFEKI SSSTYRLRLA SIMKKDEDAL SDNEDCGSID 660 DESRLSNSLS NNADCDSGIS SSRPNMGHLS PESNPLNLSS VIDESHPGES WLLGLMEGEY 720 SDLSIEEKLN ALLALIDLVR AGSSFRMEDP SAVLAECVPR IYQHGSGGKI KRPTVKRPSL 780 LSSSFGDVTD SGRLSSDICA VDSSVVLSIV CKEHRYSSMK KGLNSVGNGD ALHPIQTIFL 840 GSDRRYNRYW LFLGPCDADD PGHKQIYVES SEDGQWQVID SEEALYGLLA SLNGQGRREA 900 VLLASLEMRM AFLVEEMTSR IPADFNVSQS TQSGLCEIDR TIEDSLSPIS EIDNHSLGET 960 SFNAVTSSGA APFIFEKKVE EEKKKYERLQ AYDSWIWNNF YSNLHAVRCG KRSFFDSWTR 1020 CGSCNDLYWR DERHCKACHA TFELDFDLEE KYAVHVAKCH VREDADIFPM HKVLPSKLQA 1080 LKAAIHVIEL FMPEGVLIGA WKKSAYKLWV RRLRRTSSLH ELLQVLGDFV GSLNVDWVLQ 1140 CNAIHKCEST VEDFVTHFQN MPQTSSAVAL WLVKLDAFIA LQLDERVVGT A*

Sequence ? help Back to Top

Protein Sequence Length: 1192 aa Download sequence

MAVQFHHNNG AFTLSPPTTL NDFDEDNDAG YTLFRKNPLQ LQTLEYLYID DKNPTQSRLE  60
DYSSALGLTY EQVRRWYVER RRRDDPDAGK NIGVNRSVQS TAKGKSKMKK KKNLSSLELG  120
EPGDCTIRPG LIQDMLYSSD YIFKKIFRKD GPPLGVEFDP IPETTFQGRN DIPDGHLLGV  180
SLVQPFVTIF GKGNKQADGS GQPFGAGSPV KHREKNDVTK SAVLEAEQWN RMKTPMKKHG  240
KGKGLMSDLQ LVNYLASFRD NVGASKRGKM LARKNSQPGK TYGMGKGFMT ASQLVNPDSK  300
RRPLRRKPAA LRRSVNKVQE KKKPIFQRRK VDSSQKATQK ARKDCCKIAL DLASHDKNLC  360
SFPTKADDEE LELMELQAGP NPLTCGAHFA NGGKTKNNGC SLCKGLLPKF PPESVRMRKP  420
FHMQPWNSSL ELEKKLFKAL HFLYTYAVIL DVYPFTLDDF AKAFLDKDSS LLGKLHVCLL  480
GLLLSDIQNE ISNGLSIHSN KNGMFLNFLH MTETQDSVVN FWKTSLNPLT WTEILRQVLI  540
AAGFGSKDGN QSKGCLTKET DCMAKYGLQP DTLKGKLFSI LFEQGNSGMK VTELAKSSQI  600
ADLNLGKTDD ELEDSICSIL ASDITLFEKI SSSTYRLRLA SIMKKDEDAL SDNEDCGSID  660
DESRLSNSLS NNADCDSGIS SSRPNMGHLS PESNPLNLSS VIDESHPGES WLLGLMEGEY  720
SDLSIEEKLN ALLALIDLVR AGSSFRMEDP SAVLAECVPR IYQHGSGGKI KRPTVKRPSL  780
LSSSFGDVTD SGRLSSDICA VDSSVVLSIV CKEHRYSSMK KGLNSVGNGD ALHPIQTIFL  840
GSDRRYNRYW LFLGPCDADD PGHKQIYVES SEDGQWQVID SEEALYGLLA SLNGQGRREA  900
VLLASLEMRM AFLVEEMTSR IPADFNVSQS TQSGLCEIDR TIEDSLSPIS EIDNHSLGET  960
SFNAVTSSGA APFIFEKKVE EEKKKYERLQ AYDSWIWNNF YSNLHAVRCG KRSFFDSWTR  1020
CGSCNDLYWR DERHCKACHA TFELDFDLEE KYAVHVAKCH VREDADIFPM HKVLPSKLQA  1080
LKAAIHVIEL FMPEGVLIGA WKKSAYKLWV RRLRRTSSLH ELLQVLGDFV GSLNVDWVLQ  1140
CNAIHKCEST VEDFVTHFQN MPQTSSAVAL WLVKLDAFIA LQLDERVVGT A*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	84	ERRRRD
2	80	109	RRRRDDPDAGKNIGVNRSVQSTAKGKSKMK
3	80	112	RRRRDDPDAGKNIGVNRSVQSTAKGKSKMKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-151	HB-other family protein