PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035514-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 154aa    MW: 17543.2 Da    PI: 9.94
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035514-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.68.5e-52111341128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhP+d+elv++yL kk +g +  l   + evd++k+ePwd+p+++  + kewyf+ +rd+kyatg r+nrat+sgyWkatgkd++v++ 
  AUR62035514-RA  11 LPPGFRFHPRDDELVCDYLMKKWNGCESAL---LIEVDLNKCEPWDIPETACVGGKEWYFYNQRDRKYATGLRTNRATASGYWKATGKDRPVIR- 101
                     79***********************99655...789************7777799**************************************9. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g+lvg++ktLvfy+grapkg+ktdWvmhe+r+
  AUR62035514-RA 102 RGSLVGMRKTLVFYQGRAPKGKKTDWVMHEFRV 134
                     999****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MSSLTMVEAK LPPGFRFHPR DDELVCDYLM KKWNGCESAL LIEVDLNKCE PWDIPETACV  60
GGKEWYFYNQ RDRKYATGLR TNRATASGYW KATGKDRPVI RRGSLVGMRK TLVFYQGRAP  120
KGKKTDWVMH EFRVEGPFGP PKLNPTSKVS LSH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.22e-82NAC family protein