PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035463-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 211aa    MW: 23269.2 Da    PI: 8.4796
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035463-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH53.25.2e-173480455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     hn+ E+rRR+riN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  AUR62035463-RA 34 VHNMSEKRRRQRINEKMKALQKLIPNS-----NKTDKASMLDEAIEYLKQLQ 80
                    6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MEGIDDADCQ SEEETRMQSA SGKSSSKRSR AAEVHNMSEK RRRQRINEKM KALQKLIPNS  60
NKTDKASMLD EAIEYLKQLQ LQVQMLTLRN GSSSHPFYVP GAMQLPSAAQ LDEANSSRAG  120
SFTADQEAPM QAMFNLSSKP AFSDYKLLMT RMSENNSSAQ PFHLNPSMTV HYRPFNASMP  180
SKVLCKDPAL PQLQLDMSHC GQSSSSGISS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.13e-36bHLH family protein