PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035435-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C3H
Protein Properties Length: 411aa    MW: 44503.2 Da    PI: 6.8873
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035435-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH192.6e-06356378426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                     +lC++f     Ck+G +C F H+
  AUR62035435-RA 356 KLCMYFNSAKGCKHGTNCVFQHD 378
                     69********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
VRLFLSEESP SQVGAGAQDH LQVKKIVSGL PVNGLVADDN LPPGFEGFNP ANQLKNRLAQ  60
IPVVKWRSPP KFTLGVEWQV VSGEESKEVE IQSQRELRVL EAYYPRQSAI PLNPASAPDI  120
ECAGQDDQTL PSVPITAIEE DLTSSSQGVS HNINSGTLTA GVATSGQEDA LKAALTAVAK  180
GNEQIDHNLL VKILSNPTIL EQLVRHQGPG TGLQSVLPKP MEGPHTISRP SPGAPMYRMD  240
TPPPPAQYNN METGPSSTAM MSNGLMYPYT NGTGPMTHQH SIPPVPGVAL QAPPVQSGSS  300
SQVKDLNYYK NLIQQHGGER QADPQPPYST HPIHHPGVDQ DVDNSKPRDA KHKIMKLCMY  360
FNSAKGCKHG TNCVFQHDMS LQQRVSSISE MQSAKRMKMD REIRGPQSYS *