PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035415-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 263aa    MW: 29951.3 Da    PI: 8.1295
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035415-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.3e-11143754
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  AUR62035415-RA  1 MAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 43
                    58*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MAERRRRKRL NDRLSMLRSV VPKISKMDRT SILGDTIDYM KELLERINKL QEEIDVGSNN  60
NQLNVMSIFK DAKPNDVLVR NSPKFDVERR NLDTRVEICC AGKPGLLLST VATLEALGLE  120
IQQCVISCFN DFSLQASCCE EMEQKSLINS EEIKQALFRN AGYGGSLKSG MRSWKRYDRS  180
SMMQDDYCAL SFERGKRGRG DLEDVEEVNC SVKKAMTDSA NLTENATETR KRRHKETLDR  240
AVPITCLMIA TMELGLQKRF ED*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1310ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.16e-77bHLH family protein