PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035238-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 341aa    MW: 38076.5 Da    PI: 4.4996
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035238-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-19105153153
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                     s+ykGVr++k +g+W+AeIrdp    +r +r++lg++ taeeAa a+++ r ++
  AUR62035238-RA 105 SKYKGVRQRK-WGKWAAEIRDP----IRgARVWLGTYNTAEEAAMAYEQKRIEF 153
                     89*******9.**********7....246********************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MTDLQNPMLT QKSFYSKPKT LKKVRIYCLD PDMTDSSSDE ERENRSKRPT GSKKRIVQEI  60
ILPVNSGFNN PVAETESSCQ DDNNGPKRKR KSSDKPSTTR KPASSKYKGV RQRKWGKWAA  120
EIRDPIRGAR VWLGTYNTAE EAAMAYEQKR IEFQILMAEK SQNASCSAAT AVQNPAVSDD  180
SESVVSHNSP ASVLEIDTSA SQMKSISNID STVDIEIAKT KCVESVGIDV KESDDIVPVM  240
SSIEEEFQRS DFDLQMELDS SLMFNDFGDI FADFDAFDGL EVHGFDSLEP SDLPGFEFDF  300
NLMSIKDVSE QEMSFFDVKV GDEFNGFSCA VRAVHCFIFL *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18692PKRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-25ERF family protein