PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62035190-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

SBP

Protein Properties

Length: 1107aa MW: 121757 Da PI: 7.3914

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62035190-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.4	1.1e-39	182	259	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls+ k+yhrrhkvCe hska+++lv +++qrfCqqCsrfh l efDe+krsCrrrLa+hn+rrrk+qa AUR62035190-RA 182 MCQVDSCSEDLSKSKDYHRRHKVCELHSKATKALVGKQMQRFCQQCSRFHPLAEFDEGKRSCRRRLAGHNKRRRKTQA 259 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1107 aa Download sequence
MEEVGTQVAS PLYIHQNIGG RFCEGALIGS KRSLCYNSGS NHHQQQQQHS QIHRSGHGWN 60 PKDWEWDSSH FLARSRPLES DRLRLGSLHE VSTPNNKEVV NPVLSSSFTS KSSSPPHDDQ 120 QSGNSLRLQL GGVVDNNGTG TSFNKTSVGN VQSSNSTEDP VSSSRPNKKV RSGSPGGGNY 180 PMCQVDSCSE DLSKSKDYHR RHKVCELHSK ATKALVGKQM QRFCQQCSRF HPLAEFDEGK 240 RSCRRRLAGH NKRRRKTQAE DTTSPAIQPT DSHKTGYGNL DIVNLLTVLA RGQGNAEQNV 300 PPCPSLPDKN QLMQILSKIN SLPLPTDIAA NPHIPPCSTK NGFEQGALGQ SNMDVDAASR 360 STTDLLAVLS ATLAASSPDS LAFFSQKSNP ASCVDKNKST DMDKDTGSDA CKKPSIELQS 420 LGGERSSSSY QSPTEDSDSQ VQDTRTNLPL QLFSSSPGDD SSPNLVTSRR YFSSDSSNPT 480 EERSHSSAAP VTRKLFPLET ASESARPVRM SFSEEANVNV EASRTETSAS RMTLELFTMG 540 NKAASNSLQN LPHQAGYTSS SGSDHSPPSF NSDPQKDRTG RIIFKLFDKD PSQLPGALRT 600 QIYNWLSNSP SDMESYIRPG CVVLSIYVSM SSAAWEQLEE SFLQRVDALV QDSDFEFWRS 660 GRFSVNIGRQ LAVHKDGRIR ICKPWSTVSS PELFVVSPLA VVSGQDTSLV LRGRNLTSPG 720 TKIHCAYMGG YSSKEVLKSS DQGLPCEEIR LSEFNVHAAA DSVLGRCFIE VENGVRGNCF 780 PIIIADAKIC QELRLLEREF CEAKDSDVIT DDQAQYVASP HSHEALHFLN ELGWLFQRQK 840 SSDIAVNDFM LHRFQYLLTF STERDYSALV KTLLDIFVEA ESTMDGLSTE CVEALSNMHL 900 LHRAVKRSSR KMVDMLVHYS APCGSDSSKK YIFPPNLRGP GGITPLHLAA CTSGSYDIVD 960 ALTNDPMQIG LHSWKSLLDD GGQSPYSYAL MRNNHTLNSM VAQKLSDRKN KQVSVTIGNE 1020 IVESMVPAEV RQRPSLPLDT KQKSCSKCAM RSYSRMPGSH GFLHRPFIHS MLTIAAVCVC 1080 VCLFFKSLHV NSVTPFMWDN VDFGAM*

Sequence ? help Back to Top

Protein Sequence Length: 1107 aa Download sequence

MEEVGTQVAS PLYIHQNIGG RFCEGALIGS KRSLCYNSGS NHHQQQQQHS QIHRSGHGWN  60
PKDWEWDSSH FLARSRPLES DRLRLGSLHE VSTPNNKEVV NPVLSSSFTS KSSSPPHDDQ  120
QSGNSLRLQL GGVVDNNGTG TSFNKTSVGN VQSSNSTEDP VSSSRPNKKV RSGSPGGGNY  180
PMCQVDSCSE DLSKSKDYHR RHKVCELHSK ATKALVGKQM QRFCQQCSRF HPLAEFDEGK  240
RSCRRRLAGH NKRRRKTQAE DTTSPAIQPT DSHKTGYGNL DIVNLLTVLA RGQGNAEQNV  300
PPCPSLPDKN QLMQILSKIN SLPLPTDIAA NPHIPPCSTK NGFEQGALGQ SNMDVDAASR  360
STTDLLAVLS ATLAASSPDS LAFFSQKSNP ASCVDKNKST DMDKDTGSDA CKKPSIELQS  420
LGGERSSSSY QSPTEDSDSQ VQDTRTNLPL QLFSSSPGDD SSPNLVTSRR YFSSDSSNPT  480
EERSHSSAAP VTRKLFPLET ASESARPVRM SFSEEANVNV EASRTETSAS RMTLELFTMG  540
NKAASNSLQN LPHQAGYTSS SGSDHSPPSF NSDPQKDRTG RIIFKLFDKD PSQLPGALRT  600
QIYNWLSNSP SDMESYIRPG CVVLSIYVSM SSAAWEQLEE SFLQRVDALV QDSDFEFWRS  660
GRFSVNIGRQ LAVHKDGRIR ICKPWSTVSS PELFVVSPLA VVSGQDTSLV LRGRNLTSPG  720
TKIHCAYMGG YSSKEVLKSS DQGLPCEEIR LSEFNVHAAA DSVLGRCFIE VENGVRGNCF  780
PIIIADAKIC QELRLLEREF CEAKDSDVIT DDQAQYVASP HSHEALHFLN ELGWLFQRQK  840
SSDIAVNDFM LHRFQYLLTF STERDYSALV KTLLDIFVEA ESTMDGLSTE CVEALSNMHL  900
LHRAVKRSSR KMVDMLVHYS APCGSDSSKK YIFPPNLRGP GGITPLHLAA CTSGSYDIVD  960
ALTNDPMQIG LHSWKSLLDD GGQSPYSYAL MRNNHTLNSM VAQKLSDRKN KQVSVTIGNE  1020
IVESMVPAEV RQRPSLPLDT KQKSCSKCAM RSYSRMPGSH GFLHRPFIHS MLTIAAVCVC  1080
VCLFFKSLHV NSVTPFMWDN VDFGAM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein