PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62035070-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

ARR-B

Protein Properties

Length: 669aa MW: 73320.5 Da PI: 6.274

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62035070-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.3	8.1e-29	214	267	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl AUR62035070-RA 214 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 267 79*****************.******************************8 PP
2	Myb_DNA-binding	42.6	1.4e-13	216	266	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ AUR62035070-RA 216 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 266 678***********************************************7 PP
3	Response_reg	79.8	9.4e-27	37	145	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ + +l+++l+ +y ev+ + +e al++l+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++a ++++ + + + G AUR62035070-RA 37 VLVVDDDPTCLTILEKMLRTCRY-EVTKTNRAEHALNMLRENKngFDVVISDVHMPDMDGFKLLEQVGLEM-DLPVIMMSADDSKQVVMKGVTHG 129 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l + AUR62035070-RA 130 ACDYLIKPVRIEALKN 145 **********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MNLGGGLMGS MAMPSSTVSR KSSEVVTADQ FPVGLRVLVV DDDPTCLTIL EKMLRTCRYE 60 VTKTNRAEHA LNMLRENKNG FDVVISDVHM PDMDGFKLLE QVGLEMDLPV IMMSADDSKQ 120 VVMKGVTHGA CDYLIKPVRI EALKNIWQHV VRKKKYEYNK DVEQSGSWDE GDRQLKHDDA 180 VSSPANDGSW KNSKRKSGED DEADDKDDTT TLKKPRVVWS VELHQQFVAA VNQLGIDKAV 240 PKKILELMNV PGLTRENVAS HLQKYRLYLR RLSGVSQHQG GLNSSFMPQD PSFSTMSSLG 300 GIDLQTLAAT GQLSAQTLAA YTRLPPTIKP GISMPFVDQR NLFSFENSKL RYGDGQQSQI 360 SNVSKQMNLL HGFPTTMEPK QLAVLNQSAQ TLGSMNMQAN ASSSHQSSSL LMQQMVPQQR 420 GHISNESISS QVPRIQPSVG QPLQSNGNAN AVLSRNGIPY DPVNQSASVV DFSVNHIPEL 480 PGNSFPLGST PGITSITSKG FNQEEIGSDI KVSRGFVGSY DMFSELQHKP QEWQMQNPNM 540 GFAGSSQHVP SVQSGVNVAP SIMVNQSYVS GQKNEQNGHS MAGKPMYSAG LENQHMGMQN 600 VNQNYNSIHV NNSSRVKAES VSDVVNLGAN LFDYSPEDML STIMLKQQEG IGSGDFDFDG 660 YTLDNIPV*

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MNLGGGLMGS MAMPSSTVSR KSSEVVTADQ FPVGLRVLVV DDDPTCLTIL EKMLRTCRYE  60
VTKTNRAEHA LNMLRENKNG FDVVISDVHM PDMDGFKLLE QVGLEMDLPV IMMSADDSKQ  120
VVMKGVTHGA CDYLIKPVRI EALKNIWQHV VRKKKYEYNK DVEQSGSWDE GDRQLKHDDA  180
VSSPANDGSW KNSKRKSGED DEADDKDDTT TLKKPRVVWS VELHQQFVAA VNQLGIDKAV  240
PKKILELMNV PGLTRENVAS HLQKYRLYLR RLSGVSQHQG GLNSSFMPQD PSFSTMSSLG  300
GIDLQTLAAT GQLSAQTLAA YTRLPPTIKP GISMPFVDQR NLFSFENSKL RYGDGQQSQI  360
SNVSKQMNLL HGFPTTMEPK QLAVLNQSAQ TLGSMNMQAN ASSSHQSSSL LMQQMVPQQR  420
GHISNESISS QVPRIQPSVG QPLQSNGNAN AVLSRNGIPY DPVNQSASVV DFSVNHIPEL  480
PGNSFPLGST PGITSITSKG FNQEEIGSDI KVSRGFVGSY DMFSELQHKP QEWQMQNPNM  540
GFAGSSQHVP SVQSGVNVAP SIMVNQSYVS GQKNEQNGHS MAGKPMYSAG LENQHMGMQN  600
VNQNYNSIHV NNSSRVKAES VSDVVNLGAN LFDYSPEDML STIMLKQQEG IGSGDFDFDG  660
YTLDNIPV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-169	ARR-B family protein