PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034981-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 464aa MW: 51452 Da PI: 8.7002

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034981-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.9	4e-09	83	118	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+ +gL+++q+ +WF N+R ++ AUR62034981-RA 83 YKWPYPSESEKVALAEATGLDQKQINNWFINQRKRH 118 5679*****************************885 PP
2	ELK	35.6	2e-12	38	59	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL+sLkqE+s AUR62034981-RA 38 ELKNHLLKKYSGYLSSLKQELS 59 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MYGADDKSEG VGSSEEDQEN SGGETELPEI DPRAEDRELK NHLLKKYSGY LSSLKQELSK 60 KKKKGKLPKE ARQKLLSWWE LHYKWPYPSE SEKVALAEAT GLDQKQINNW FINQRKRHWK 120 PSEDMQFMVM DGIHPHNPAL YMDGMSSSYS ASCNVSGSSN SSESMKDPYP LWKFVVKGDK 180 ISGGGGNYNW KCNFCGEVKN GSYTRVKAHL LVPPFSNEPI SSHTSNEATS VRLGSSDNVK 240 KRKSNNTISD AFNMKSRDQF DSEISRMFYT GGLPFNLTRN PYYVSSYTIA ANSNHSGYKP 300 PGYNKLRTTL LCKEKENVDR LLQLIKETWK TKGVSIVSDG WSDPQRRPLI NIMIASKKGP 360 MFMKAIDCSG EIKDKDFIAT LLSEVIDEIG DQNVVQIITD NASNCKVAGE LVEVTLGSCT 420 TSQAGCTAAL AGYTATLGSC TASLGKLHSP PGRLHNHPRQ AAQ*

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MYGADDKSEG VGSSEEDQEN SGGETELPEI DPRAEDRELK NHLLKKYSGY LSSLKQELSK  60
KKKKGKLPKE ARQKLLSWWE LHYKWPYPSE SEKVALAEAT GLDQKQINNW FINQRKRHWK  120
PSEDMQFMVM DGIHPHNPAL YMDGMSSSYS ASCNVSGSSN SSESMKDPYP LWKFVVKGDK  180
ISGGGGNYNW KCNFCGEVKN GSYTRVKAHL LVPPFSNEPI SSHTSNEATS VRLGSSDNVK  240
KRKSNNTISD AFNMKSRDQF DSEISRMFYT GGLPFNLTRN PYYVSSYTIA ANSNHSGYKP  300
PGYNKLRTTL LCKEKENVDR LLQLIKETWK TKGVSIVSDG WSDPQRRPLI NIMIASKKGP  360
MFMKAIDCSG EIKDKDFIAT LLSEVIDEIG DQNVVQIITD NASNCKVAGE LVEVTLGSCT  420
TSQAGCTAAL AGYTATLGSC TASLGKLHSP PGRLHNHPRQ AAQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-63	TALE family protein