PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034835-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 298aa    MW: 33973.7 Da    PI: 5.6839
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034835-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94.3e-1795140248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g W+t+Ed +l+ +v+++G + W+ Ia++m  gR +kqc++rw ++l
   AUR62034835-RA  95 GQWSTDEDSRLKSLVEKHGERKWAFIAEKMV-GRAGKQCRERWINHL 140
                      68*****************************.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MTTVVPTTLD QAYLSNFASS CNGYYSSNNP NSNFYGVGNM HNNSVNGLFF EEVESQNSEV  60
RHEEQRSSSK HEEQSLVFEG WRSSKGKKRK ACAIGQWSTD EDSRLKSLVE KHGERKWAFI  120
AEKMVGRAGK QCRERWINHL RDNIKLGFHN HLEQCLESPH LFLDTSNEST LSNPSHHEKL  180
MFMNNQSCSQ DGYPSYDAVS VYETDQVQSN PVMFAPDHLM MVTLGGTSTN VYSDRLICDM  240
LNGDAPKLDA PNEWMINNNH MMGDYVVENV LYDSSEHRKD MDLHEMMISL NYLKSNC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58850.11e-20MYB family protein