PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034546-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 245aa    MW: 26743.8 Da    PI: 5.3487
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034546-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.7e-184190255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     ykGVr++  +g+WvAeIr+p   + r +r +lg+f t  eAa a++aa++kl+g
  AUR62034546-RA 41 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTSHEAALAYDAAARKLYG 90
                    69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MLKSKLGLGE KKQGKKHQVC QASSRKGCMR GKGGPENALC TYKGVRQRTW GKWVAEIREP  60
NRGARLWLGT FNTSHEAALA YDAAARKLYG TDAKLNLPEV YPPQLPNLAQ NHVQAQVQAR  120
GQVRIPCYQN GYNLCCSSEN SSLSGASDLS FPIEETNSTS TITDSTTTSV ESFGENEVGI  180
NHGLWENSNP SLPELDDSLW AETAMTLGFP PPVIDPQPEF SISDEPGLLS GNLYDDSFQF  240
LWSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-40ERF family protein