PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034455-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 466aa MW: 51272.7 Da PI: 8.5356

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034455-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.9	1e-33	162	218	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgse+prsYYrCt+++Cpvkkkvers d++++ei+Y+g+Hnhe AUR62034455-RA 162 DDGYNWRKYGQKQVKGSEYPRSYYRCTTPNCPVKKKVERSF-DGHITEIIYKGQHNHE 218 8**************************************.*************8 PP
2	WRKY	103.2	1.4e-32	356	414	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gC+v+k+ver+++d ++v++tYeg+Hnh+ AUR62034455-RA 356 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTMGCKVRKHVERASTDYSAVITTYEGKHNHD 414 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MSDHFKDMHK LFGQPPSQQQ QQRPSPGALG ASPGGLTNLF SDPFPESEFR SFSDLLAGAI 60 ATQLPASGEL NWGSDNKGQN DQNGGGGGDG NSGFKQNRPV GLVLPPVAPV FNISPGFSPS 120 AFLNSPTFLS PLASRHPAVP DHPNHERRPH TNFPVAVDKP ADDGYNWRKY GQKQVKGSEY 180 PRSYYRCTTP NCPVKKKVER SFDGHITEII YKGQHNHERP QTGRRGKDSG LLQLAAGSGG 240 SEGQFGNSVW PGGVGREYDS AQATSIQLHG PSDSEESGEN SDLIKDDDYN DEPKAKRRQK 300 HVLIMHNCIL YICMKREIDQ DNTWNGGAGQ SDGSFTRTTM TEPKIVVQTR SDVDLLDDGY 360 RWRKYGQKVV KGNPNPRSYY KCTTMGCKVR KHVERASTDY SAVITTYEGK HNHDVPATRG 420 SNNTASNIDT TQMKIQNSVG QVNFGNNNDQ RPITLRLKEE QLVIS*

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MSDHFKDMHK LFGQPPSQQQ QQRPSPGALG ASPGGLTNLF SDPFPESEFR SFSDLLAGAI  60
ATQLPASGEL NWGSDNKGQN DQNGGGGGDG NSGFKQNRPV GLVLPPVAPV FNISPGFSPS  120
AFLNSPTFLS PLASRHPAVP DHPNHERRPH TNFPVAVDKP ADDGYNWRKY GQKQVKGSEY  180
PRSYYRCTTP NCPVKKKVER SFDGHITEII YKGQHNHERP QTGRRGKDSG LLQLAAGSGG  240
SEGQFGNSVW PGGVGREYDS AQATSIQLHG PSDSEESGEN SDLIKDDDYN DEPKAKRRQK  300
HVLIMHNCIL YICMKREIDQ DNTWNGGAGQ SDGSFTRTTM TEPKIVVQTR SDVDLLDDGY  360
RWRKYGQKVV KGNPNPRSYY KCTTMGCKVR KHVERASTDY SAVITTYEGK HNHDVPATRG  420
SNNTASNIDT TQMKIQNSVG QVNFGNNNDQ RPITLRLKEE QLVIS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-90	WRKY family protein