PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034038-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 550aa MW: 64337.4 Da PI: 8.2045

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034038-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.4	9.5e-08	10	52	48	90
FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++++ r+ + tr +Cka+++ k +k+g++ev + +HnHel+ AUR62034038-RA 10 KTRKPRQVSITRSNCKACIRAKVNKEGQFEVVAHVIQHNHELT 52 4677788899*******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MVDEEDVNVK TRKPRQVSIT RSNCKACIRA KVNKEGQFEV VAHVIQHNHE LTKPQWHYLH 60 RSERKMTEEK VVTIKTMKSS GLTTMDTYNY MATEAGGEQN IGHSVVDHLN FCSRLRMEQI 120 EAGDAQTLVN ILSQKQSKDP NFFFRVKFDK EGRICNIFWR DSMMLEDYRI YGDVLVFDTT 180 YRTNRYNLIC APFVGINNHW HNCMFACAFI GDETTDSFVW LLQTFFKAME DRKPTSIFTD 240 QDQEMANAIL EVIPNTRHRL CIWHLEQNAI TRFGALKKDK EFKFAFNQCL KIVYELKDKW 300 CPALCRDFFS AGILSSQRSE STNHAIGFRA SKASTLTEFY TIFKKTTNRW RSTEKYDEFT 360 CSKSIAFTSL PLSGMLKHVA QVFTLSLFRN FEEEFGYSMA TTVQMLGSNE ECLLYQVTLE 420 DKPWSAHQVN YIQESQTVWC TCKNFEASGW LCYHCIRILH LHSVTRIPDK YVSKGWTKFA 480 KTEAWDRLKN QDPKQQYIPW RQTMMRKYYN LILKSQENEE TRAFMEESFR NSLKMVEDLL 540 ASAAQKESA*

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MVDEEDVNVK TRKPRQVSIT RSNCKACIRA KVNKEGQFEV VAHVIQHNHE LTKPQWHYLH  60
RSERKMTEEK VVTIKTMKSS GLTTMDTYNY MATEAGGEQN IGHSVVDHLN FCSRLRMEQI  120
EAGDAQTLVN ILSQKQSKDP NFFFRVKFDK EGRICNIFWR DSMMLEDYRI YGDVLVFDTT  180
YRTNRYNLIC APFVGINNHW HNCMFACAFI GDETTDSFVW LLQTFFKAME DRKPTSIFTD  240
QDQEMANAIL EVIPNTRHRL CIWHLEQNAI TRFGALKKDK EFKFAFNQCL KIVYELKDKW  300
CPALCRDFFS AGILSSQRSE STNHAIGFRA SKASTLTEFY TIFKKTTNRW RSTEKYDEFT  360
CSKSIAFTSL PLSGMLKHVA QVFTLSLFRN FEEEFGYSMA TTVQMLGSNE ECLLYQVTLE  420
DKPWSAHQVN YIQESQTVWC TCKNFEASGW LCYHCIRILH LHSVTRIPDK YVSKGWTKFA  480
KTEAWDRLKN QDPKQQYIPW RQTMMRKYYN LILKSQENEE TRAFMEESFR NSLKMVEDLL  540
ASAAQKESA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-81	FAR1 family protein