PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62033996-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 250aa MW: 28716.6 Da PI: 6.5157 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.2 | 4.6e-11 | 59 | 101 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 Er+RR+++N+ + +Lr ++P + K++Ka+i + A++YIk+L AUR62033996-RA 59 VSERNRRKKLNEQLYNLRAVVPIiS------KMDKASIIKDAINYIKEL 101 57*********************66......****************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 250 aa Download sequence |
MDSFVEEYPL YWGTADIGMY FDNQDFDSLG LDETLSSYYD YDSSSPDGCA SSMASKNIVS 60 ERNRRKKLNE QLYNLRAVVP IISKMDKASI IKDAINYIKE LHEQERRIKS DISDLEYRRS 120 KNGIDNTCSM MDYEQELSGL LIKSKKKRTD HRKQHYDSNG CCRTSIDDLE VRVSYVGERT 180 IVVSLTCSKR EGTMVKLCEM FESLKLKIIT AHITAFAGRL LKTVFLEADE LEKDHLRRKI 240 ETVISSTHV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G57150.1 | 1e-61 | bHLH family protein |