PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033880-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 621aa    MW: 68896.4 Da    PI: 7.5629
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033880-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.71.2e-146821799
                    E--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3 17 vlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                     +p kf+ e+    + +   l+l  +sg++W v l      g+ ++++GW  Fvk++ ++ gD++vF+++g+s+f  +v++f++
  AUR62033880-RA  6 KVPSKFV-EYlADRTSG--PLSLIGPSGNVWYVDL--LELNGHLYFRDGWPTFVKDHSIQCGDTLVFRYNGSSNF--NVQIFDE 82
                    5799999.553555444..5***************..999999**************************999999..****986 PP
2B345.61.2e-14243338198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f+ v+  s+ + +g + +p  f ++h   +++ +++tl++++g  W v+ i   ++++  + + +GW  Fv++n +k  D+++F+l+  s+fe++
  AUR62033880-RA 243 FVRVMCYSNISGNGTMKIPTYFSKDHL--PKCRVKVTLMNLNGDCWMVNSIPAVRRQAtlHSFCGGWPAFVRDNSIKIEDVCMFELV--SNFEMR 333
                     66677778889999*********9996..34999****************87555555459999*********************86..59999* PP

                     EEEE- CS
              B3  94 vkvfr 98 
                     v+v+r
  AUR62033880-RA 334 VRVLR 338
                     *9998 PP
3B359.37e-19493584198
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f kv+++s+v+ s  l +p kfa++h  +     + +l+l++++g sW+v      +++++ + +GW +F++ n++k+gD++vF+l + + + l 
  AUR62033880-RA 493 FMKVMMNSNVGGSFTLNVPSKFAAAHlpS----YKAELVLRNLKGDSWNVVS--AHYGNSTKFCGGWMSFARMNDVKVGDICVFELLD-E-RLLQ 579
                     89************************643....3358***************..77777777899********************876.3.3367 PP

                     EEEE- CS
              B3  94 vkvfr 98 
                     v+vf+
  AUR62033880-RA 580 VRVFE 584
                     88776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 621 aa     Download sequence    
MFCLQKVPSK FVEYLADRTS GPLSLIGPSG NVWYVDLLEL NGHLYFRDGW PTFVKDHSIQ  60
CGDTLVFRYN GSSNFNVQIF DESSCEKDEA FYADCSQGAS KCYENLEKKR ERDMEASMLS  120
LVAEKKMRVR WVPVGNGEKN FKTCTKEGQK SNKTANGRDN RTKDLATASD TTVVLAIPSL  180
NGPDGRASQV KFHVKKISPK VMSSKVKKVS KKDQMTDFQK IPSISKFIQS RAANYFTSNL  240
PYFVRVMCYS NISGNGTMKI PTYFSKDHLP KCRVKVTLMN LNGDCWMVNS IPAVRRQATL  300
HSFCGGWPAF VRDNSIKIED VCMFELVSNF EMRVRVLRPG LEGLECQIGN SSAVDGVGLG  360
GRHLEAAENV AHRTGAHPLQ ELDQTYEPCT PQYKMDKIKT DAMPYMQQEA ASINTVDDFI  420
AVHVPACASG SSIGTNCDST ADKHLVCYTG KTMSYQANEN SLVDLQATHS MNMQPAVGEV  480
SDALSFTSPF PSFMKVMMNS NVGGSFTLNV PSKFAAAHLP SYKAELVLRN LKGDSWNVVS  540
AHYGNSTKFC GGWMSFARMN DVKVGDICVF ELLDERLLQV RVFEGSHKRP DCVYDKAVVD  600
DSTASIESTE YGLLPETFID *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-20B3 family protein