PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62033783-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 246aa MW: 27211.2 Da PI: 9.5525

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62033783-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	33	1.9e-10	106	208	1	88
FAR1 1 kfYneYAkevGFsvrkskskks.....krngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 kf+++Y+k+ GF v +++ + + +++ + ++ ++C + gk++ +++ + ++r+++++gC +++ + dg wev+k AUR62033783-RA 106 KFFRKYGKQRGFGVYRAAGNFKtengkTDKSQRRSYIWRCECAGKPDLRRRVngkrvygggLSLDLNRRKTKKCGCLVEMRAVCKPDGCWEVKKA 200 6***********9998777734432223334455679****9998867777777766666799********************** PP FAR1 82 eleH.nHe 88 +eH nH+ AUR62033783-RA 201 ITEHeNHN 208 *97775 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MLKRILISGI KGLLEWSALG DFGGDFGVAG WLGLGGLVGL GGVRGGLVGV MDTPLNDVLS 60 SAVFVDGPNA ATPVRCVVES DEGVYEELLE HPEVGMVFGN WEDADKFFRK YGKQRGFGVY 120 RAAGNFKTEN GKTDKSQRRS YIWRCECAGK PDLRRRVNGK RVYGGGLSLD LNRRKTKKCG 180 CLVEMRAVCK PDGCWEVKKA ITEHENHNPT PRKSRYIAMY RQDEITNAVR RRLFNDCSAG 240 HYIKS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	2e-08	FAR1 family protein