PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033072-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 304aa    MW: 34701.1 Da    PI: 5.7616
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033072-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.11.2e-1613891698
                    EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 16 lvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    l++p+kf+ e+   +   s   tl+ +sg+ W+v++  +k+ + +++++GW +Fv ++g+k g f+vF ++g+s+f   v+vf+
  AUR62033072-RA 13 LRIPRKFV-ECsRAD--LSSSCTLRGQSGNIWKVQI--QKTEKDVLFADGWGNFVTDHGIKYGCFLVFCYVGDSSF--EVSVFD 89
                    89******.563433..56689**************..************************************99..888887 PP
2B342.61.1e-131972681487
                     T-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3  14 grlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                     ++ ++pk+ a +h ++k ++ +++l+ +   +sW++ ++++  +++  +++GW+ Fv +n+L+e Df+vF+l ++
  AUR62033072-RA 197 RLNTIPKEWAVKHLLQK-SDHDVILRVPGVeESWTLGCRWTPLQCQ--FRQGWSTFVLENNLEEHDFCVFELLQK 268
                     4449*********7776.4569999996655*******77777766..89*********************8764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MEEELQWRKM VFLRIPRKFV ECSRADLSSS CTLRGQSGNI WKVQIQKTEK DVLFADGWGN  60
FVTDHGIKYG CFLVFCYVGD SSFEVSVFDV TGCEVECPHF TRNTNMSLNT SCRSLLHVEN  120
DESKGARTLE ADIDGSVEVI AVDEEYDSDA SSQENNFRGS QSAICHAADK GKAKGKIHEE  180
EDLELSSDHE KRFHKLRLNT IPKEWAVKHL LQKSDHDVIL RVPGVEESWT LGCRWTPLQC  240
QFRQGWSTFV LENNLEEHDF CVFELLQKGN LGHKNNSVFD VHIFRLVKEV VPLTVLRDIK  300
SRV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-16B3 family protein