PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032725-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 313aa    MW: 34348.6 Da    PI: 9.1047
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032725-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552.1e-173180255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d +   ++ r +lg+f tae Aa+a+++a+  l+g
  AUR62032725-RA 31 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEAAARAYDEAACLLRG 80
                    799******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MGAKSVIPIN KVTKLKGKSK KSSSSVNRSN KFVGVRQRPS GRWVAEIKDT TQKIRMWLGT  60
FETAEAAARA YDEAACLLRG SNTRTNFVVT HVSPNSPVAS RIKNLLKNKK LESQKSSNVD  120
HQVANTLVTP STTNSAAFSS STANTAFSNP FNNLASTNSS IAQFQNNFGY KSLDNFSAQT  180
QGLHQNREYN GDVYRPQLNG FVGNYELVDY STLFQCGMPG GCDINPSMLK LPLSLSCQNQ  240
SQETSEMPKN VALPQAMGAE LLEMEKIKME KDISASYYNA ASNGLHEFID FVHDPIESLW  300
DLPPLYSSFC SI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-24ERF family protein