PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032672-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 354aa    MW: 39224.2 Da    PI: 6.9688
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032672-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.5e-11143188454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++++ E++RR++ N++++ L +l+P++     +K + a+i+  A+++I++L
  AUR62032672-RA 143 KNSATEKQRRRNFNDKYDYLSKLIPNQ-----TKTDRASIVLDAINHIHEL 188
                     57899*********************9.....9***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MGFTNFVENI HHPTTTDLLT LLHLPISSFA TAPSSFGIGK LPSSPPPPSA FGFLGEFNPA  60
MMVDYPVHAA GSGSSYDPNL FPQNSAFMMR DQLLFHPNHE YSTGNLNGID GVYQEEDTQF  120
LGNGILEFRK GKGKVGNNNK SPKNSATEKQ RRRNFNDKYD YLSKLIPNQT KTDRASIVLD  180
AINHIHELRR TVGELKILVD KKRISKMKRH KTHEDTNTNI PVGGDQHGTG VDGVAVVKPE  240
PEEDLNVSTA IQLRSSWIQR KWKDSEVDVR IVDDDVTIKL VQRKKINCLL SVSRTLDELQ  300
LDLRHVAGGE VGDYYSYLFN TKICEGSSVY ASAIANKLIE VVERESGAAS VVD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.17e-57bHLH family protein