PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032654-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 267aa    MW: 30135.3 Da    PI: 7.2753
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032654-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.72.4e-14281061497
                     T-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  14 grlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     + +++p +f++++    +g + e+  + l + ++  W vkl  +++   + +++GW+eF++ n+L +gDf+vF+ +  s+  ++v+v+
  AUR62032654-RA  28 NTFSIPVSFMKRIemelDGHQVEG--VALVTDDNHHWAVKL--EGG---CRFRDGWREFCEHNELSVGDFLVFTQI--SKLIFRVTVY 106
                     4699***********874444454..999999*********..444...459**********************44..4554466665 PP
2B340.16.6e-13150240598
                     -..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
              B3   5 ltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesg...rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                     ++++ v k g+ ++p +f ++     +    ++   ++ +++g   r W v++     +gr++l  GWk+F+ +n+L+++D++vF +++  +f +
  AUR62032654-RA 150 TISPTVIKMGQASFPLSFSRKLkkelQ---GCPSSTVVLTTKGqphRHWIVEI----EGGRHLLD-GWKKFCVDNQLEVNDVLVFVYQN--SFIF 234
                     56788999999********99986443...3444444444455588*******....66679888.********************864..6766 PP

                     EEEEE- CS
              B3  93 vvkvfr 98 
                     +v+v++
  AUR62032654-RA 235 CVSVYD 240
                     887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MHTTKFSDEP NSNNGAKFMQ PFIPGFFNTF SIPVSFMKRI EMELDGHQVE GVALVTDDNH  60
HWAVKLEGGC RFRDGWREFC EHNELSVGDF LVFTQISKLI FRVTVYDPTT ACARQFSNGT  120
KKRGNPMEED GAATAQLPSA ESKYPTYNVT ISPTVIKMGQ ASFPLSFSRK LKKELQGCPS  180
STVVLTTKGQ PHRHWIVEIE GGRHLLDGWK KFCVDNQLEV NDVLVFVYQN SFIFCVSVYD  240
SVTKCELRFS LSSDHHIKLN GTFYIA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.13e-21B3 family protein