PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62032221-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 503aa MW: 55578.9 Da PI: 6.5725

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62032221-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.1	6.7e-13	356	403	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h +Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq AUR62032221-RA 356 MSHVLAERQRREKLNQRFYALRAVVPNiS------KMDKASLLLDAISYINDLQ 403 68999********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MGQNYVLKEE EKVMVEAVVG KDAYNFLMST ACDDSLSEFN PPGDILNLQQ GLCQIVDGSS 60 WNYAIFWQIA SSKNGKAVLI WGDGHCRDPK AVLARESLDG GNGKFGKNEA KKRVLEKLHA 120 CFGGSVEDNF AATLDKVSDV EMLYLTSMYY WFRLDSSLGP AKSFTSGRPI WVSDVRSCLD 180 HYQSRAHLAK SAMFQTVVFV PVKTGVLELG SVRTVMEEHS LVQMVKTVFG ESHSFPARAS 240 PKVFGRDLSL GSGSRPRSMN ISFAPKKEDD GSFSAESHVA GSDMGPKNIF GSPSNGKHGE 300 HGDKKLFSEI NFGGSNPETD FPALDEASEE FLLHAAELRA RKRPVRRPAS GREEAMSHVL 360 AERQRREKLN QRFYALRAVV PNISKMDKAS LLLDAISYIN DLQTKISALE AEKEAANPKQ 420 EELPIPEIDF QARQDDALVH VSFPLDDHPV SKVVRTLREH QLVALEANVS TADDKMVHTF 480 KIRAQTEGAE NLKEKLETAL SK*

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MGQNYVLKEE EKVMVEAVVG KDAYNFLMST ACDDSLSEFN PPGDILNLQQ GLCQIVDGSS  60
WNYAIFWQIA SSKNGKAVLI WGDGHCRDPK AVLARESLDG GNGKFGKNEA KKRVLEKLHA  120
CFGGSVEDNF AATLDKVSDV EMLYLTSMYY WFRLDSSLGP AKSFTSGRPI WVSDVRSCLD  180
HYQSRAHLAK SAMFQTVVFV PVKTGVLELG SVRTVMEEHS LVQMVKTVFG ESHSFPARAS  240
PKVFGRDLSL GSGSRPRSMN ISFAPKKEDD GSFSAESHVA GSDMGPKNIF GSPSNGKHGE  300
HGDKKLFSEI NFGGSNPETD FPALDEASEE FLLHAAELRA RKRPVRRPAS GREEAMSHVL  360
AERQRREKLN QRFYALRAVV PNISKMDKAS LLLDAISYIN DLQTKISALE AEKEAANPKQ  420
EELPIPEIDF QARQDDALVH VSFPLDDHPV SKVVRTLREH QLVALEANVS TADDKMVHTF  480
KIRAQTEGAE NLKEKLETAL SK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-141	bHLH family protein