PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62031814-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 760aa MW: 83247.8 Da PI: 4.7106

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62031814-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	63.4	3.6e-20	617	714	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++gr+vlpkk ae+h +++ +e++ + +ed ++r+W++++++ ++ks++y+l+ ++ +Fv++ngL+egDf+v++ ++ +++ AUR62031814-RA 617 QKVLKQSDVGNLGRIVLPKKEAETHlpELEAREGIPIAMEDiGTSRVWNMRYRFwpNNKSRMYLLE-NTGDFVRSNGLQEGDFIVIY--SDvKCG 708 79***********************99999999**7778***99777777777777.******************..566999 PP ..EEEE CS B3 91 elvvkv 96 +++++ AUR62031814-RA 709 KYMIRG 714 888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 760 aa Download sequence
MGLKKEMKEM VLHGEDLQNF DVVGGEGMKD SEEEIWFETA SHPFESNNND NMSNENDFLD 60 VDVSDPSSLF YADFPPLPEF PCMSSSSSSS STPAATAAKP FGVCSTATTS SSASTASSGA 120 ASWAVLKSDA DQDPEPASST AAPVTDHDQA QRVEEREILM DDVDHCMDMM QNFGCIDMLE 180 NTDICWDPSP LFDDNNGDEH QFLQPEEMLV NRHLVEEDEE ERVFEQFMQQ QKDGESTNTS 240 INNDASGVVD GIVGQNSGGC GDGEPDSSPD DLALVFFEWL KSNKEAISAE DLRNIKIKKS 300 TIENAAKRLG GGKEGMKQLL KLILQWVQNH HLQNKKMMMS GEDNEFHVVN NVSGSMINRQ 360 SYSIQDHKND TATTTPSDTS AANPSSAPES QCFSPTTWLP GPPPSQPYVS DTPVMVPMTA 420 PPPPPGFPPT VGYMGGDPYG GGSPMAAYMS DYHAWGPTPM RYGMSPHYGG YPDVAAQFGG 480 YANPPPYPGF YYHPGPTEGL VRLGSSATKE ARKKRMARQR SQQMMMSQMA EQQHAAAVVG 540 NGNCGVVAPH GNWVYWPPPP PPQVVAPQQV NHPGPVVGQM MPPQPPMERA ANGYQKQVGI 600 EKKQGWKTEK NLRFLLQKVL KQSDVGNLGR IVLPKKEAET HLPELEAREG IPIAMEDIGT 660 SRVWNMRYRF WPNNKSRMYL LENTGDFVRS NGLQEGDFIV IYSDVKCGKY MIRGVKVRPQ 720 QQSAKPELTN KKSNKTQKTE PTSSPAGNGP SSSPTVTQS*

Sequence ? help Back to Top

Protein Sequence Length: 760 aa Download sequence

MGLKKEMKEM VLHGEDLQNF DVVGGEGMKD SEEEIWFETA SHPFESNNND NMSNENDFLD  60
VDVSDPSSLF YADFPPLPEF PCMSSSSSSS STPAATAAKP FGVCSTATTS SSASTASSGA  120
ASWAVLKSDA DQDPEPASST AAPVTDHDQA QRVEEREILM DDVDHCMDMM QNFGCIDMLE  180
NTDICWDPSP LFDDNNGDEH QFLQPEEMLV NRHLVEEDEE ERVFEQFMQQ QKDGESTNTS  240
INNDASGVVD GIVGQNSGGC GDGEPDSSPD DLALVFFEWL KSNKEAISAE DLRNIKIKKS  300
TIENAAKRLG GGKEGMKQLL KLILQWVQNH HLQNKKMMMS GEDNEFHVVN NVSGSMINRQ  360
SYSIQDHKND TATTTPSDTS AANPSSAPES QCFSPTTWLP GPPPSQPYVS DTPVMVPMTA  420
PPPPPGFPPT VGYMGGDPYG GGSPMAAYMS DYHAWGPTPM RYGMSPHYGG YPDVAAQFGG  480
YANPPPYPGF YYHPGPTEGL VRLGSSATKE ARKKRMARQR SQQMMMSQMA EQQHAAAVVG  540
NGNCGVVAPH GNWVYWPPPP PPQVVAPQQV NHPGPVVGQM MPPQPPMERA ANGYQKQVGI  600
EKKQGWKTEK NLRFLLQKVL KQSDVGNLGR IVLPKKEAET HLPELEAREG IPIAMEDIGT  660
SRVWNMRYRF WPNNKSRMYL LENTGDFVRS NGLQEGDFIV IYSDVKCGKY MIRGVKVRPQ  720
QQSAKPELTN KKSNKTQKTE PTSSPAGNGP SSSPTVTQS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-71	B3 family protein