PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031621-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 150aa    MW: 16919.6 Da    PI: 9.604
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031621-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.93.7e-1356147298
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                        lt+ +v+ + +l++p + a+   +++      ++ ++  +sW++++i ++   +  l k Wk+F+ +n+Lk+gD+++F+l++++  +l+v+v
  AUR62031621-RA  56 HVNLTKTHVSPLYLLTIPAEGARLLPNIE-A---PVILTRGTESWTMNYIGNNI-VHKRLDKRWKQFAVDNKLKVGDVCTFELTSKDPMRLKVQV 145
                     56678888999999999999997665553.3...35566788*******65444.4467************************988999999999 PP

                     E- CS
              B3  97 fr 98 
                     +r
  AUR62031621-RA 146 LR 147
                     87 PP

Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MSAFYLKHTS SYKSLSSEAY YGPVPEFGFS AKEMKPRANT CEDIDIEPKT GAPFFHVNLT  60
KTHVSPLYLL TIPAEGARLL PNIEAPVILT RGTESWTMNY IGNNIVHKRL DKRWKQFAVD  120
NKLKVGDVCT FELTSKDPMR LKVQVLRVL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108115KRLDKRWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18000.12e-07B3 family protein