PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62031613-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 255aa MW: 28705.9 Da PI: 7.1481 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.5 | 1.1e-18 | 66 | 118 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe+ +++ e++ +LAk lgL+ rqV +WFqNrRa++k AUR62031613-RA 66 KKRLNMEQVKTLEKNFEQANKLEPERKVQLAKALGLQPRQVAIWFQNRRARWK 118 556899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 130.4 | 7.2e-42 | 64 | 155 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+ eqvk+LE++Fe+ +kLeperKv+la++Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr++d+lk++n++L +++++L++el AUR62031613-RA 64 EKKKRLNMEQVKTLEKNFEQANKLEPERKVQLAKALGLQPRQVAIWFQNRRARWKTKQLEKDYSVLKRQFDSLKADNDSLLSQNKKLHAELI 155 69**************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MMNRSMSFSG YHLHQIDHTQ NQDDVLGGGG HEEHEHDHHG GGGDQDEMSD DGSQVVVVGP 60 RGGEKKKRLN MEQVKTLEKN FEQANKLEPE RKVQLAKALG LQPRQVAIWF QNRRARWKTK 120 QLEKDYSVLK RQFDSLKADN DSLLSQNKKL HAELITLRNR EPADYGAINL NNADTKSYWS 180 NNGSEISSDM NLNNASRTVT PRTGSPLSTN PSTKLQFPPN SFMPTNLSAG GIQLWHVEWG 240 HEIEKDSLSY VLFS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 121 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15150.1 | 4e-60 | HD-ZIP family protein |