PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62031585-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

ARR-B

Protein Properties

Length: 519aa MW: 57182.6 Da PI: 6.9602

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62031585-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	47.8	3.1e-15	159	191	23	55
G2-like 23 GsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 G+ +A+Pk+ilelm+v+ Lt+e+v+SHLQkYRl AUR62031585-RA 159 GTGEAVPKKILELMNVDKLTRENVASHLQKYRL 191 7789****************************8 PP
2	Response_reg	77.8	3.9e-26	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ ++ll+++l+k +y +v++++++ +al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+g+++++ + + G AUR62031585-RA 20 VLAVDDDPICLRLLESLLRKCQY-HVTTTSQAIKALKMLRENKnmFDLVISDVHMPDMDGFKLLEFVGL-EMDLPVIMLSANGDPKLVMKGITHG 112 799******************.***********999999***************98855.458****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ eel + AUR62031585-RA 113 ACDYLLKPVRLEELKN 128 ***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MTVEQREDES IDQFPVGMRV LAVDDDPICL RLLESLLRKC QYHVTTTSQA IKALKMLREN 60 KNMFDLVISD VHMPDMDGFK LLEFVGLEMD LPVIMLSANG DPKLVMKGIT HGACDYLLKP 120 VRLEELKNIW QHVVRRKKFD PKDRNSSYSL DKNSGGDNGT GEAVPKKILE LMNVDKLTRE 180 NVASHLQKYR LYLKRISAVA NQQANMAAAF GGPDYLRMNA VNFHGFNASP QFHNNSLRPI 240 PPPGVLGRLN TPAGMGGLHG LPPSGLIQLS QPQNPTSSIT DSKFHPNLFA GDHTGNVLQG 300 MPTSLEFDQL HKNNTILSGS SNSILSLPNS SLTMQGRSSQ ERQSLDSFEV NMNSAPNLLD 360 HNRCSSSWPA AVQSQPNSMS PMDNRVHDFS PNISIQNRLQ NSNMMGENMM QNTSHVAKQV 420 WDVDFLDGSA NPSVTGTHSA YNPSSRNRDT GYDMMGQPGF DCLATQHDQM LQNSAVDVTR 480 KTKQGQFMEQ GGRPLGNYNA GNGAGSLEDV VTAMFKPV*

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MTVEQREDES IDQFPVGMRV LAVDDDPICL RLLESLLRKC QYHVTTTSQA IKALKMLREN  60
KNMFDLVISD VHMPDMDGFK LLEFVGLEMD LPVIMLSANG DPKLVMKGIT HGACDYLLKP  120
VRLEELKNIW QHVVRRKKFD PKDRNSSYSL DKNSGGDNGT GEAVPKKILE LMNVDKLTRE  180
NVASHLQKYR LYLKRISAVA NQQANMAAAF GGPDYLRMNA VNFHGFNASP QFHNNSLRPI  240
PPPGVLGRLN TPAGMGGLHG LPPSGLIQLS QPQNPTSSIT DSKFHPNLFA GDHTGNVLQG  300
MPTSLEFDQL HKNNTILSGS SNSILSLPNS SLTMQGRSSQ ERQSLDSFEV NMNSAPNLLD  360
HNRCSSSWPA AVQSQPNSMS PMDNRVHDFS PNISIQNRLQ NSNMMGENMM QNTSHVAKQV  420
WDVDFLDGSA NPSVTGTHSA YNPSSRNRDT GYDMMGQPGF DCLATQHDQM LQNSAVDVTR  480
KTKQGQFMEQ GGRPLGNYNA GNGAGSLEDV VTAMFKPV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-104	ARR-B family protein