PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031570-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HB-other
Protein Properties Length: 340aa    MW: 37632.4 Da    PI: 6.6806
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031570-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox22.81.6e-072673002154
                     HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     k +yp++e++ +L +++gL+ +q+ +WF N+R +
  AUR62031570-RA 267 KWPYPTEEDKVRLVQETGLQLKQINNWFINQRKR 300
                     469*****************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MSAIPTQPGE LTHNEETGKP EIGDGEISVG AGNRGGGGGD RGEQVNWQNA KFKAEILGHP  60
LYEQLLAAHV ACLRIATPVD QIPRIGAQLD QSQNVVAKYS ALGSGHSMVG DDKELDQFMT  120
QYVLLLCSFK EQLQQHVRVH AMEAVMACWE IEQSLQSLTG VSPGEGTGAT MSDDEDDPIE  180
SDSNLFDGGL DGADTMGFGP LIPTESERSL MERVRQELKH ELKQASHIGY KDKIVDIREE  240
ILRKRRAGKL PGDTTSVLKA WWQSHSKWPY PTEEDKVRLV QETGLQLKQI NNWFINQRKR  300
NWHSNPSSSS ALKSKRKRWR SGKVKMGKLS FCSAAALWS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1298318RKRNWHSNPSSSSALKSKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25220.11e-158TALE family protein