PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031428-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 321aa    MW: 34998.6 Da    PI: 8.9765
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031428-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.42.8e-1266110147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   AUR62031428-RA  66 RESWTEPEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 110
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MVSMNPSSAE EFYLDANGVA LPGLNPFSAP PPEESPASAA TATVSSPTDD SSSKKIRKPY  60
TITKSRESWT EPEHDKFLEA LQLFDRDWKK IEAFIGSKTV IQIRSHAQKY FLKVQKSGSN  120
EHLPPPRPKR KAAHPYPQKA PKIGPSVSQP TGSLQSSSLL LEPGLQRPDS TTIPQYPNNT  180
TAVSSWVNNS QSNVAKGELK PPVPPIANNC SSSTESTAMA RNTGGLNEAV KHAPPLRVLP  240
DFAQVYGFIG SVFDPEVSGH MQRLKKMDPI DVETVLLLMR NLSINLRSPD FEDHRRLLSS  300
YDIESDKGIP GGMRDVVCGK *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.16e-89MYB_related family protein