PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62031415-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NF-X1

Protein Properties

Length: 1175aa MW: 128009 Da PI: 8.1737

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62031415-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	17.5	9.1e-06	424	441	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C ++CH+GpC++C AUR62031415-RA 424 CGNHVCAEICHPGPCGEC 441 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 1175 aa Download sequence
MSFQAQIDSR DRTRFSGQNG RQQAQAQQWV ARAPGILSSP PSNFNVYAGR NDGNVFNVYA 60 GRNDGNVFER QGQVDNRERQ GQMDSRERQG QMDSRERQGQ TDYRERQGQM NSRGGRGFRX 120 XXXXXXXXXX HMGRPHYLRR ERNEPREGVG EIGGTVNKDK SNQKKWGGNV VDSVLPQLVQ 180 EIQEKLSKGI VECMICYDMV RRNAPVWSCS SCYSIFHLNC IKKWARAPTS ADTSAEKLQG 240 YNWRCPGCQA VQLTTSKDIR YICFCGKRHD PPSDLYLTPH SCGEPCGKSL ERELPRADLS 300 KEDMCPHLCV LQCHPGPCPP CKAFAPPRPC PCGKKVITTR CSERKSVYTC GEVCNKILEC 360 GRHHCDQICH VGPCEPCQVP IDSSCFCKKK SEVVICGELS LKGEIRPDDG LYSCSSTCGK 420 KLKCGNHVCA EICHPGPCGE CEFLPGKVKT CYCGKTNLRV WRRSCLDPIS TCSGTCGKLL 480 PCNKHYCKDK CHAGNCPPCS ELVTQKCRCG STSRTVECYK TTLASEKFVC DRQCGRKKNC 540 GRHRCSERCC PLSDSRNTAS GDWNPHFCSM PCGKKLKCGQ HSCEAFCHCG HCPPCMETIF 600 TDLTCACGRT SIPPPLPCGT PPPSCQYPCS VPQPCGHQST HSCHFGDCPP CSVPIAKECV 660 GGHVVLRNIP CGSKDITCNK LCGKTRRCGL HSCSRSCHPA PCDPSCGPSD PAVKGSCGQV 720 CGAPRRDCRH TCQALCHPTT PCPESRCEFP VTITCSCGRI TATVPCDAGG SNLGFSAVNV 780 LEASTLQKLP APLQPVEANE KRVPLGQRKL MCDDECAKLE RKRVLADAFD ISQPSLDALH 840 FGENAAVSQV VSELLRRDPK WVLAVEERCK HLVLGKGKGC SGSNIKVHVF CPMLKDKRDA 900 IRLIAERWKL SINAAGWEPR RFIVVHATAK SKAPARIIGP KGSAAVSVHH PPVFDPLVDM 960 DPRHVVALLD LPSDADISTL VLRFGGECEL VWLNDKNALA VFSDPARAAT AMRRLDNGSV 1020 YQGAAVVQHI GVGGAGAAAA SAWGGVAASS ALKGNPWKKA VVKETNSWVE DSWGEEDWSG 1080 GSVTADVGPS TSSKGREAPV TSTTNRWTVL NPDSSLSSIE SSARALDFAK RTAAAESTSE 1140 REMKTVPSSS ATVQLMGTPD DNAEVVDDWE KAYE*

Sequence ? help Back to Top

Protein Sequence Length: 1175 aa Download sequence

MSFQAQIDSR DRTRFSGQNG RQQAQAQQWV ARAPGILSSP PSNFNVYAGR NDGNVFNVYA  60
GRNDGNVFER QGQVDNRERQ GQMDSRERQG QMDSRERQGQ TDYRERQGQM NSRGGRGFRX  120
XXXXXXXXXX HMGRPHYLRR ERNEPREGVG EIGGTVNKDK SNQKKWGGNV VDSVLPQLVQ  180
EIQEKLSKGI VECMICYDMV RRNAPVWSCS SCYSIFHLNC IKKWARAPTS ADTSAEKLQG  240
YNWRCPGCQA VQLTTSKDIR YICFCGKRHD PPSDLYLTPH SCGEPCGKSL ERELPRADLS  300
KEDMCPHLCV LQCHPGPCPP CKAFAPPRPC PCGKKVITTR CSERKSVYTC GEVCNKILEC  360
GRHHCDQICH VGPCEPCQVP IDSSCFCKKK SEVVICGELS LKGEIRPDDG LYSCSSTCGK  420
KLKCGNHVCA EICHPGPCGE CEFLPGKVKT CYCGKTNLRV WRRSCLDPIS TCSGTCGKLL  480
PCNKHYCKDK CHAGNCPPCS ELVTQKCRCG STSRTVECYK TTLASEKFVC DRQCGRKKNC  540
GRHRCSERCC PLSDSRNTAS GDWNPHFCSM PCGKKLKCGQ HSCEAFCHCG HCPPCMETIF  600
TDLTCACGRT SIPPPLPCGT PPPSCQYPCS VPQPCGHQST HSCHFGDCPP CSVPIAKECV  660
GGHVVLRNIP CGSKDITCNK LCGKTRRCGL HSCSRSCHPA PCDPSCGPSD PAVKGSCGQV  720
CGAPRRDCRH TCQALCHPTT PCPESRCEFP VTITCSCGRI TATVPCDAGG SNLGFSAVNV  780
LEASTLQKLP APLQPVEANE KRVPLGQRKL MCDDECAKLE RKRVLADAFD ISQPSLDALH  840
FGENAAVSQV VSELLRRDPK WVLAVEERCK HLVLGKGKGC SGSNIKVHVF CPMLKDKRDA  900
IRLIAERWKL SINAAGWEPR RFIVVHATAK SKAPARIIGP KGSAAVSVHH PPVFDPLVDM  960
DPRHVVALLD LPSDADISTL VLRFGGECEL VWLNDKNALA VFSDPARAAT AMRRLDNGSV  1020
YQGAAVVQHI GVGGAGAAAA SAWGGVAASS ALKGNPWKKA VVKETNSWVE DSWGEEDWSG  1080
GSVTADVGPS TSSKGREAPV TSTTNRWTVL NPDSSLSSIE SSARALDFAK RTAAAESTSE  1140
REMKTVPSSS ATVQLMGTPD DNAEVVDDWE KAYE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein