PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031401-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 455aa    MW: 49222.6 Da    PI: 7.7175
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031401-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS344.81.4e-105794542374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++l+ e+A a+++g++e a+ lLarls +++++g++ qRla+y+ +AL+ r     +e+++ ++        s+e++ a+  ++++sP++kf+ l
  AUR62031401-RA  79 KQLIAEAAMAIAEGKNEPATDLLARLSRISNSKGSSEQRLAFYMGNALRCRACP--NEISAPVHELY-----SEEQMLAMYSLYDISPCFKFGLL 166
                     68899************************************************9..56654333332.....6688889999************* PP

            GRAS  97 taNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.......egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                     +aN  +lea+ ++     +vH+iDfd+++G+Q+++Ll+aLa+R+       +g+ +l++T+v+  e +++   e+++e L k+Ae++g++++f+ 
  AUR62031401-RA 167 AANLVMLEAITSAlqegIKVHVIDFDVGHGAQYINLLRALAERRsqivsarAGSYELKVTVVET-EVNNRGVKESVREGLIKLAERVGINLKFQG 260
                     ***98888888776656899*********************99967776666699*********.5568888899******************** PP

            GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
                      +++r+++l+ e+L ++ gEa++Vn++++lhr++desvs+e+ rde+L+ vk+l+P+ v++veqe++ n+++F++r+ e++ yy al+dsle++l
  AUR62031401-RA 261 -LSRRITELTRESLGCEDGEAIVVNFAFKLHRVPDESVSMENLRDELLRRVKGLNPRAVTLVEQEMNGNTAPFMTRVNESCAYYGALLDSLESTL 354
                     .59******************************************************************************************** PP

            GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLv 368
                     p+e+++r+ vE+  lgr+ +n vaceg+er+er e ++kWr+r+++aGF+  pls+++a+++++ l+     + g++v+ee+g + +gW++r+L+
  AUR62031401-RA 355 PKENSDRARVEEG-LGRKMSNSVACEGRERVERAEVFGKWRARMGMAGFELKPLSQSVAESMRAKLNSARggNPGFTVKEENGGVGFGWMGRTLT 448
                     *************.****************************************************998877899******************** PP

            GRAS 369 svSaWr 374
                     ++SaWr
  AUR62031401-RA 449 VASAWR 454
                     *****8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    
MSPSGNPNPS PSPSPSPNTN HASSSTSGSS NTNNTNTIAS NNNNMISPSP TSSTSSCCST  60
SAPSLPPQQQ PPPETLSAKQ LIAEAAMAIA EGKNEPATDL LARLSRISNS KGSSEQRLAF  120
YMGNALRCRA CPNEISAPVH ELYSEEQMLA MYSLYDISPC FKFGLLAANL VMLEAITSAL  180
QEGIKVHVID FDVGHGAQYI NLLRALAERR SQIVSARAGS YELKVTVVET EVNNRGVKES  240
VREGLIKLAE RVGINLKFQG LSRRITELTR ESLGCEDGEA IVVNFAFKLH RVPDESVSME  300
NLRDELLRRV KGLNPRAVTL VEQEMNGNTA PFMTRVNESC AYYGALLDSL ESTLPKENSD  360
RARVEEGLGR KMSNSVACEG RERVERAEVF GKWRARMGMA GFELKPLSQS VAESMRAKLN  420
SARGGNPGFT VKEENGGVGF GWMGRTLTVA SAWR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-138GRAS family protein