PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031117-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 268aa    MW: 30625.3 Da    PI: 5.808
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031117-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.7e-19125176256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrd ++   + +r++lg+f taeeAa a+++a+++++g+
  AUR62031117-RA 125 HYRGVRRRP-WGKYAAEIRDSRK---KgARVWLGTFITAEEAALAYDKAALRIRGA 176
                     7********.**********433...34*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MNIKKEEHKP PETAILESIW ANYIGVTNSQ EAWNNTPGIF QDWIGIPSLE EENDGPSNAL  60
KRLPSLGRWV SMGSETWEEL LDKIVGSSTK NPRETCYVED KKNEWTINNS KENMEKTNKN  120
IPTRHYRGVR RRPWGKYAAE IRDSRKKGAR VWLGTFITAE EAALAYDKAA LRIRGAAKAS  180
LNFPLDAVTK AVVGSQYDKN NHCNNPWKRE ARDWELQSDY VDELMIQQPS FKRSRFSMDN  240
LLDSQHDVLE LEDLGNDILE NLLSSTL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.11e-29ERF family protein