PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62031114-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WOX

Protein Properties

Length: 352aa MW: 37957.3 Da PI: 7.4384

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62031114-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.9	7.2e-18	62	122	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ AUR62031114-RA 62 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRRIRAQLqeygQVGDANVFYWFQNRKSRSKH 122 89***************99***********************************995 PP
2	Wus_type_Homeobox	113.1	1.4e-36	61	124	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi+iLe++++sG+++P+++ei+ri+a+L+eyG+++d+NVfyWFQNrk+R+++kq AUR62031114-RA 61 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHKQ 124 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MASSNRHWPS MFKSKPCNNQ SWSQQHDSNH HQSSLLSNSC GRSSSSNSPF SSGCEERSPE 60 PKPRWNPKPE QIRILEAIFN SGMVNPPRDE IRRIRAQLQE YGQVGDANVF YWFQNRKSRS 120 KHKQRTLQAK TTAATAAAAT NNVITNPLFF PLHQSGGNSF SQGLCFGPTH HDDASATINV 180 PASSDQAVGG FSSLLLGDMF GGDHSKRDHE VEKLKFQQEL SFLVTNPPNT STCAVTSSSP 240 VVPTAISGSL GQLLGVGESG GLSGKSTVFI NGMVFELPVG PFNVKEEFGE DAVLVHSGSG 300 HPVMTNEWGV TVHPLQHGAS YYLVGCVAAS PLLHKLDSTP DLLAPGFPYQ V*

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MASSNRHWPS MFKSKPCNNQ SWSQQHDSNH HQSSLLSNSC GRSSSSNSPF SSGCEERSPE  60
PKPRWNPKPE QIRILEAIFN SGMVNPPRDE IRRIRAQLQE YGQVGDANVF YWFQNRKSRS  120
KHKQRTLQAK TTAATAAAAT NNVITNPLFF PLHQSGGNSF SQGLCFGPTH HDDASATINV  180
PASSDQAVGG FSSLLLGDMF GGDHSKRDHE VEKLKFQQEL SFLVTNPPNT STCAVTSSSP  240
VVPTAISGSL GQLLGVGESG GLSGKSTVFI NGMVFELPVG PFNVKEEFGE DAVLVHSGSG  300
HPVMTNEWGV TVHPLQHGAS YYLVGCVAAS PLLHKLDSTP DLLAPGFPYQ V*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-48	WOX family protein