PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031089-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 161aa    MW: 18672.1 Da    PI: 8.9192
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031089-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.3e-192172556
                    SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                     ++t+eq++ Le+ F+ +r+++ +++ +LA++lg++ rqV +W+qN+Ra++k
  AUR62031089-RA 21 KRLTQEQVRLLEASFKLDRKLDMDRKFHLAQELGIPSRQVAIWYQNKRARWK 72
                    579************************************************9 PP
2HD-ZIP_I/II104.77.1e-3421110493
     HD-ZIP_I/II   4 rrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     +rl++eqv+lLE sF+ ++kL+ +rK +la+eLg+  rqva+W+qn+RAR+k++ lE+ y++L+++++++  +nerLekev++L++el++
  AUR62031089-RA  21 KRLTQEQVRLLEASFKLDRKLDMDRKFHLAQELGIPSRQVAIWYQNKRARWKSQSLEMGYATLQQRLESVLVDNERLEKEVQRLNQELEN 110
                     8*************************************************************************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MYSSKHSQNR KQHPQPKCTS KRLTQEQVRL LEASFKLDRK LDMDRKFHLA QELGIPSRQV  60
AIWYQNKRAR WKSQSLEMGY ATLQQRLESV LVDNERLEKE VQRLNQELEN VRQMLVASTS  120
TSNSYACDEE GNSGLINGEP SSCFHRELYA CLIGNNERQL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53980.15e-35HD-ZIP family protein