PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029763-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 859aa    MW: 94498.7 Da    PI: 7.366
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029763-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.6e-18270369299
                     EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                     + vl+ sd+++ grlvlpk +ae++   ++++e+  ++++d +g++W +++++  +++s++yvl+ G     ++ +L++gD+v+F++++  e++l
  AUR62029763-RA 270 LFVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPIKIQDVKGKEWLFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGKL 362
                     557899*********************555566778***************9989999999***9.********************876.77778 PP

                     EEEEE-S CS
              B3  93 vvkvfrk 99 
                     v++++++
  AUR62029763-RA 363 VMGFRKA 369
                     8877765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 859 aa     Download sequence    
SAFQRQIYCE EYHADDSGWR ECVTCCKRLH CGCIASLSLI ELLDCGGVRC IGCARNSGPS  60
LSLNSGKCEG SGPCNVTENN AGLKQFGNYK ENNGSNQLSM MQNPNSNLAF GLLKQEEVLL  120
SPAQTGSTWI SNFTQSPMGI FQKARPDIST SSMQAKDNYG AVAHPNLNIT LGVPTGTLQA  180
TSSTIVDERE HRKISDTFHQ GFAPQNLLPT PPKVAFSPAS DTNSSVIPQI RVARPPVEGR  240
GRHQLLPRYW PRITDQELQQ ITGEYPWLFL FVLSASDAGR IGRLVLPKAC AEAYFPPISQ  300
PEGLPIKIQD VKGKEWLFQF RFWPNNNSRM YVLEGVTPCI QSMQLQAGDT VTFSRMDPEG  360
KLVMGFRKAS NSASVQDAAS PAIRNASLSS ESFFSGVIEN LPVMSGCSGL LQSMKGSTDT  420
HINALPRQLD SAGGNVPWHS SEKCNERTED GMLSTSMMML ERKKSRNIGS KSKRLLIDNQ  480
DVLALRLTWE EVQGMLRPPQ CARPSVVVIE DYEIEEYEEP PVFGKSSIFT ARPSGVVEQW  540
AQCDNCSKWR RLPGDILLPP KWTCADNAWD QSRCFCSASE ELGPRELENF RHLNKDSTKR  600
RMVMGSRMAQ EQESSGLNAL ATAAVLGDNS NDPGTSSVAA TTKHPRHRPG CSCIVCIQPP  660
SGKGKHKSTC TCTVCMTVKR RFKTLMMRKK KRQSEQEAEI ALKNHQQQNP SKDIKADAEK  720
NKSYPENQHE TEDDLQVGPA QTNDGQGQNP ISLLTESGKS LDLNFHPQRD EDLKVKPSQS  780
SLTNLLQLAS FPLDAYMKHS GLASLTAEQQ ASSTSLTRQA VGEIGGKVVD DHPLSPPEQV  840
NLSNGKCEPE NKQQCDNL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1679690KRRFKTLMMRKK
2679692KRRFKTLMMRKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.10.0B3 family protein