PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62029763-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 859aa MW: 94498.7 Da PI: 7.366 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.6 | 9.6e-18 | 270 | 369 | 2 | 99 |
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 + vl+ sd+++ grlvlpk +ae++ ++++e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++l AUR62029763-RA 270 LFVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPIKIQDVKGKEWLFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGKL 362 557899*********************555566778***************9989999999***9.********************876.77778 PP EEEEE-S CS B3 93 vvkvfrk 99 v++++++ AUR62029763-RA 363 VMGFRKA 369 8877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 859 aa Download sequence |
SAFQRQIYCE EYHADDSGWR ECVTCCKRLH CGCIASLSLI ELLDCGGVRC IGCARNSGPS 60 LSLNSGKCEG SGPCNVTENN AGLKQFGNYK ENNGSNQLSM MQNPNSNLAF GLLKQEEVLL 120 SPAQTGSTWI SNFTQSPMGI FQKARPDIST SSMQAKDNYG AVAHPNLNIT LGVPTGTLQA 180 TSSTIVDERE HRKISDTFHQ GFAPQNLLPT PPKVAFSPAS DTNSSVIPQI RVARPPVEGR 240 GRHQLLPRYW PRITDQELQQ ITGEYPWLFL FVLSASDAGR IGRLVLPKAC AEAYFPPISQ 300 PEGLPIKIQD VKGKEWLFQF RFWPNNNSRM YVLEGVTPCI QSMQLQAGDT VTFSRMDPEG 360 KLVMGFRKAS NSASVQDAAS PAIRNASLSS ESFFSGVIEN LPVMSGCSGL LQSMKGSTDT 420 HINALPRQLD SAGGNVPWHS SEKCNERTED GMLSTSMMML ERKKSRNIGS KSKRLLIDNQ 480 DVLALRLTWE EVQGMLRPPQ CARPSVVVIE DYEIEEYEEP PVFGKSSIFT ARPSGVVEQW 540 AQCDNCSKWR RLPGDILLPP KWTCADNAWD QSRCFCSASE ELGPRELENF RHLNKDSTKR 600 RMVMGSRMAQ EQESSGLNAL ATAAVLGDNS NDPGTSSVAA TTKHPRHRPG CSCIVCIQPP 660 SGKGKHKSTC TCTVCMTVKR RFKTLMMRKK KRQSEQEAEI ALKNHQQQNP SKDIKADAEK 720 NKSYPENQHE TEDDLQVGPA QTNDGQGQNP ISLLTESGKS LDLNFHPQRD EDLKVKPSQS 780 SLTNLLQLAS FPLDAYMKHS GLASLTAEQQ ASSTSLTRQA VGEIGGKVVD DHPLSPPEQV 840 NLSNGKCEPE NKQQCDNL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 679 | 690 | KRRFKTLMMRKK |
2 | 679 | 692 | KRRFKTLMMRKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32010.1 | 0.0 | B3 family protein |